RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LTC4SQ16873 150 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 LRRC10Q5BKY1 277 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 NKAPLQ5M9Q1 402 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 C1orf100Q5SVJ3 147 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ATAD3CQ5T2N8 411 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ATPAF1Q5TC12 328 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 GPR107Q5VW38 600 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM53AQ6NSI3 398 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 Q6P435 159 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 CD200R1LQ6Q8B3 271 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 BAIAP2L2Q6UXY1 529 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF782Q6ZMW2 699 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 BCL6BQ8N143 479 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PNLDC1Q8NA58 520 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PLPPR1Q8TBJ4 325 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 NEK7Q8TDX7 302 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 RAB40AQ8WXH6 277 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ITFG2Q969R8 447 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC25A28Q96A46 364 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 C1orf159Q96HA4 380 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 MED30Q96HR3 178 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 C1orf147Q96MC9 270 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 FUNDC2Q9BWH2 189 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SIRT7Q9NRC8 400 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 RASL12Q9NYN1 266 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 OPN4Q9UHM6 478 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 RPUSD1Q9UJJ7 312 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 INSIG2Q9Y5U4 225 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 AUP1Q9Y679 476 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 V9GY05 133 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 DYSFO75923 2080 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV24A0A0B4J272 114 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV20A0A0B4J274 112 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV40A0A0B4J280 105 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A0G2JMP0 313 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A0X1KG70 313 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 KIR2DS1A0A191URI9 304 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 A8MXK9 166 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 K7N7A8 449 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC17A2O00624 439 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC22A1O15245 554 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SOCS1O15524 211 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 NDUFA2O43678 99 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ENSAO43768 121 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 AIREO43918 545 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF737O75373 536 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 MMP23AO75900 390 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TOX4O94842 621 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PAHP00439 452 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 IGHV4-38-2P0DP08 117 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 GTF2F2P13984 249 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OMGP23515 440 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 COX7A1P24310 79 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SRP14P37108 136 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 GDNFP39905 211 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 MTNR1BP49286 362 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 VEGFCP49767 419 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 RBM11P57052 281 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 RPL31P62899 125 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 UNC119Q13432 240 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 RAB11BQ15907 218 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 C2orf76Q3KRA6 126 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 MOGAT2Q3SYC2 334 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PAN3Q58A45 887 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 KLF17Q5JT82 389 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 UTF1Q5T230 341 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 IDNKQ5T6J7 187 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PRAMEF5Q5TYX0 476 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OLFML2AQ68BL7 652 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM200BQ69YZ2 307 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SIGIRRQ6IA17 410 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 FIP1L1Q6UN15 594 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 BTNL3Q6UXE8 466 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ASCL4Q6XD76 172 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 BRD3OSQ6XYD6 125 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC16A12Q6ZSM3 486 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 GDPD3Q7L5L3 318 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TCF23Q7RTU1 214 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 VMO1Q7Z5L0 202 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAPPC6BQ86SZ2 158 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 Q8IYB0 196 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 IZUMO1Q8IYV9 350 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SAXO1Q8IYX7 474 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF561Q8N587 486 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 Q8N7P7 452 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 NKAIN3Q8N8D7 197 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ZSCAN4Q8NAM6 433 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SUMF2Q8NBJ7 301 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PXT1Q8NFP0 134 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OR4M2Q8NGB6 313 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OR51T1Q8NGJ9 327 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OR13F1Q8NGS4 319 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 NDNFQ8TB73 568 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TBC1D15Q8TC07 691 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms