RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 USP43Q70EL4 1123 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 GDPD3Q7L5L3 318 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 NKAIN3Q8N8D7 197 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 Q8NFD4 153 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 C22orf15Q8WYQ4 148 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 METTL9Q9H1A3 318 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 TCF7L1Q9HCS4 588 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 ACOT13Q9NPJ3 140 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 PCDHB16Q9NRJ7 776 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 C19orf12Q9NSK7 152 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 IL36GQ9NZH8 169 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 ING4Q9UNL4 249 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 LRRC42Q9Y546 428 aa10.31□□□□□ -0.76
CCNC-216ENST00000523961 MAGEA13PA6NCF6 341 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 MGST3O14880 152 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 ZNF780AO75290 641 aaPredicted RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 SC5DO75845 299 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 CDRT1O95170 752 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 HTR3BO95264 441 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 OR2H2O95918 312 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 CSTBP04080 98 aaKnown RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 ZNF44P15621 663 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 LMO1P25800 156 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 EDDM3BP56851 147 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 EMX1Q04741 257 aaPredicted RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 INSL4Q14641 139 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 GRK1Q15835 563 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 TMEM200BQ69YZ2 307 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 METAP1DQ6UB28 335 aaPredicted RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 C17orf107Q6ZR85 190 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 VMO1Q7Z5L0 202 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 CEACAM19Q7Z692 300 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 PHC2Q8IXK0 858 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 JAGN1Q8N5M9 183 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 CHST4Q8NCG5 386 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 OR4M1Q8NGD0 313 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 OR51T1Q8NGJ9 327 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 OR10K1Q8NGX5 313 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 LHX4Q969G2 390 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 TMEM203Q969S6 136 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 NKX3-1Q99801 234 aaPredicted RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 SLC6A7Q99884 636 aa10.3□□□□□ -0.76
CCNC-216ENST00000523961 METTL8Q9H825 291 aaKnown RBP10.3□□□□□ -0.76
CCNC-216ENST00000523961 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 CENPVL3A0A0U1RRI6 287 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 hCG_1809904A0A1W2PP81 198 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 A0A1W2PPE2 198 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 A0A1W2PR64 198 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 A0A1W2PRV1 198 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 SIRPB1O00241 398 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 DEGS1O15121 323 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 PSPNO60542 156 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 RGS9O75916 674 aaPredicted RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 UCHL1P09936 223 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 PRTN3P24158 256 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 HILS1P60008 231 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 RPS25P62851 125 aaKnown RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 SCN1BQ07699 218 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 GPR176Q14439 515 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 IL13RA2Q14627 380 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 HSD17B12Q53GQ0 312 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 Q6P435 159 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 SPARTQ8N0X7 666 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 BCL6BQ8N143 479 aaPredicted RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 Q8N7P7 452 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 OR4S1Q8NGB4 309 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 FCGR1BQ92637 280 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 MUL1Q969V5 352 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 UQCC2Q9BRT2 126 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 CHST6Q9GZX3 395 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 SLITRK2Q9H156 845 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 UNKLQ9H9P5 680 aaKnown RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 MRPS28Q9Y2Q9 187 aaKnown RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 SF3B6Q9Y3B4 125 aaKnown RBP10.29□□□□□ -0.76
CCNC-216ENST00000523961 ATRQ13535 2644 aa10.29□□□□□ -0.76
CCNC-216ENST00000523961 A0A0G2JK05 382 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 hADV38S2A0JD32 116 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 FUOMA2VDF0 154 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 ARL6IP5O75915 188 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 SRMP19623 302 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 SERPINA2P20848 420 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 ERP29P30040 261 aaKnown RBP10.28□□□□□ -0.76
CCNC-216ENST00000523961 GABRA5P31644 462 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 OR3A1P47881 315 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 GP2P55259 537 aaKnown RBP10.28□□□□□ -0.76
CCNC-216ENST00000523961 KCTD21Q4G0X4 260 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 NHLRC3Q5JS37 347 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms