RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 OR52L1Q8NGH7 329 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 OR6K6Q8NGW6 343 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 OR2T4Q8NH00 348 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 GNPDA2Q8TDQ7 276 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 PIGCQ92535 297 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 MCUR1Q96AQ8 359 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 SGK3Q96BR1 496 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 C12orf43Q96C57 262 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 MED30Q96HR3 178 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 PGAM5Q96HS1 289 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 C7orf34Q96L11 122 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 TMEM68Q96MH6 324 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 GAFA1Q96PS6 74 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 RAB3IPQ96QF0 476 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 HOPXQ9BPY8 73 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 RTL8AQ9BWD3 113 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 OPA3Q9H6K4 179 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 RAB18Q9NP72 206 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 MRGBPQ9NV56 204 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 OR6C3Q9NZP0 311 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 SAMD4AQ9UPU9 718 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 CEPT1Q9Y6K0 416 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 COMMD3-BMI1R4GMX3 469 aa4.23□□□□□ -1.73
CTNNA1-239ENST00000523685 hCG_38984A0A1B0GV85 526 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 DHRS12A0PJE2 317 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 MEX3AA1L020 520 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR2AT4A6NND4 320 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF878C9JN71 531 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 SIGLEC5O15389 551 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 IDH3BO43837 385 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 RHBDL1O75783 438 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ATP6V1G2O95670 118 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ACAA1P09110 424 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 CLUP10909 449 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 GLRA1P23415 457 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 RRM2P31350 389 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OTX1P32242 354 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 GPM6AP51674 278 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF121P58317 390 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 PSME3P61289 254 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 GRB2P62993 217 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 IL5RAQ01344 420 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 EMX1Q04741 257 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 CRMP1Q14194 572 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF260Q3ZCT1 412 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 DMRTC1Q5HYR2 192 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 HCP5Q6MZN7 132 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 SHFQ7M4L6 423 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 LHFPL4Q7Z7J7 247 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 HAPLN4Q86UW8 402 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 TMEM219Q86XT9 240 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 NDUFA11Q86Y39 141 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ERI1Q8IV48 349 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 TIGD4Q8IY51 512 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 FTMTQ8N4E7 242 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 SLC37A3Q8NCC5 494 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 CSNK2A3Q8NEV1 391 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR4F17Q8NGA8 305 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR4M1Q8NGD0 313 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR9Q2Q8NGE9 314 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR5D13Q8NGL4 314 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR6N2Q8NGY6 317 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ANGPTL6Q8NI99 470 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 SCARB1Q8WTV0 552 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 RNF170Q96K19 258 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 OR4F4Q96R69 305 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 RANBP3Q9H6Z4 567 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 SP140LQ9H930 580 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF702PQ9H963 129 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 EFCAB1Q9HAE3 211 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ABCB10Q9NRK6 738 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 C19orf12Q9NSK7 152 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 DCAF13Q9NV06 445 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 TAS2R1Q9NYW7 299 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 ZNF319Q9P2F9 582 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 CDH10Q9Y6N8 788 aa4.22□□□□□ -1.73
CTNNA1-239ENST00000523685 PLXNB1O43157 2135 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 IGKV1D-17A0A075B6S4 117 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 IGHV4-28A0A0C4DH34 117 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 TMEM210A6NLX4 147 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 ZNF732B4DXR9 585 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 K7EIL1 84 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 SLC22A2O15244 555 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 GLCEO94923 617 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 SOX14O95416 240 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 FABP3P05413 133 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 H2BFMP0C1H6 154 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 PSG2P11465 335 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 PIPP12273 146 aaPredicted RBP4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 CCL3L1P16619 93 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 SPI1P17947 270 aa4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 CFL1P23528 166 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-239ENST00000523685 ACKR3P25106 362 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms