RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 LCN2P80188 198 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ZP2Q05996 745 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 OR5AS1Q8N127 324 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 C12orf76Q8N812 135 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 GATSQ8NAP1 163 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 TECTBQ96PL2 329 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 PLK3Q9H4B4 646 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 BANF2Q9H503 90 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 DAPP1Q9UN19 280 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 BLACEA4D250 179 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ANKUB1A6NFN9 424 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 SLC16A7O60669 478 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 LCATP04180 440 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 SLC25A6P12236 298 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF20P17024 532 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 CTSSP25774 331 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 CEACAM3P40198 252 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 VEGFBP49765 207 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 LINC00310P59036 64 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 P2RY6Q15077 328 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ACOT6Q3I5F7 207 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 IL22RA1Q8N6P7 574 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ABHD14AQ9BUJ0 271 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 B3GALT1Q9Y5Z6 326 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 CCL5P13501 91 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF10P21506 573 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 CSNK1A1P48729 337 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 YPEL3P61236 119 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 BAXQ07812 192 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 EXT1Q16394 746 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 NNATQ16517 81 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 SP6Q3SY56 376 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 CPEB2Q7Z5Q1 589 aaKnown RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 OR1N1Q8NGS0 311 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 RNF138Q8WVD3 245 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 SPACA5Q96QH8 159 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 WNT6Q9Y6F9 365 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 CABIN1Q9Y6J0 2220 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 FAM186AA6NE01 2351 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 SEC16AO15027 2179 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 KIAA1324LA8MWY0 1029 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 NRG2O14511 850 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TNFSF12O43508 249 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 S100A7P31151 101 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF121P58317 390 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 FAM53BQ14153 422 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 KLHL24Q6TFL4 600 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 GLIPR1L1Q6UWM5 242 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 NUFIP2Q7Z417 695 aaKnown RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 RASL10BQ96S79 203 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 NICN1Q9BSH3 213 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM59Q9BXS4 323 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 OR1A2Q9Y585 309 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 HIDE1A8MVS5 230 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 SOX1O00570 391 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TRAPPC6AO75865 159 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF17P17021 662 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 SRP14P37108 136 aaKnown RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 RPS15AP62244 130 aaKnown RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 ENDOGQ14249 297 aaKnown RBP7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM183BQ1AE95 376 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM41BQ5BJD5 291 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 OR4C5Q8NGB2 326 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 OR52N5Q8NH56 324 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 RNF133Q8WVZ7 376 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM56Q96MV1 263 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 RBKSQ9H477 322 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 MOB1AQ9H8S9 216 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 CALHM2Q9HA72 323 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 FBRSQ9HAH7 460 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 GP6Q9HCN6 339 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM56-RWDD3S4R434 201 aa7.3□□□□□ -1.24
CSMD1-213ENST00000523488 TRBV11-1A0A0K0K1C0 115 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 WNT5AP41221 380 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 DEFB103AP81534 67 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 CYP2G1PQ6ZSU1 146 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 RTL10Q7L3V2 364 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 C7orf61Q8IZ16 206 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 CISD2Q8N5K1 135 aaKnown RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 KCNG3Q8TAE7 436 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 REEP6Q96HR9 211 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 TXN2Q99757 166 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 PSMG3Q9BT73 122 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 PATZ1Q9HBE1 687 aaKnown RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 LRIT1Q9P2V4 623 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 MRPS28Q9Y2Q9 187 aaKnown RBP7.29□□□□□ -1.24
CSMD1-213ENST00000523488 LRP12Q9Y561 859 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 FAM24AA6NFZ4 105 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 CEBPZOSA8MTT3 80 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 SOCS1O15524 211 aa7.29□□□□□ -1.24
CSMD1-213ENST00000523488 NUDT14O95848 222 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 359.1 ms