RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 LCN12Q6JVE5 192 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 SBSNQ6UWP8 590 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 BZW1Q7L1Q6 419 aaKnown RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 PHF13Q86YI8 300 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 FAM83FQ8NEG4 500 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 BPIFCQ8NFQ6 507 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 OR5D13Q8NGL4 314 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 SUN5Q8TC36 379 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 NELFBQ8WX92 580 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 C22orf15Q8WYQ4 148 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 S100PBPQ96BU1 408 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 LRRC39Q96DD0 335 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 ATP6V1G3Q96LB4 118 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 EBNA1BP2Q99848 306 aaKnown RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 OR8D2Q9GZM6 311 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 MYOZ1Q9NP98 299 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-206ENST00000523469 POLE4Q9NR33 117 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 CTPS2Q9NRF8 586 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 EXD2Q9NVH0 621 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 STK38LQ9Y2H1 464 aa3.46□□□□□ -1.86
CPNE3-206ENST00000523469 IGKV3D-11A0A0A0MRZ8 115 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 IGKV1-8A0A0C4DH67 115 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 A0A1W2PPV9 198 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 F8VZ95 297 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 H3BNH8 94 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 SMC2O95347 1197 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 FGFR1OPO95684 399 aaKnown RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 IGLV2-23P01705 113 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 SERPIND1P05546 499 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 NCK1P16333 377 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 ATP1B3P54709 279 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 CTBP2P56545 445 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 RPS15AP62244 130 aaKnown RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 XIAPP98170 497 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 BAMBIQ13145 260 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 MAB21L1Q13394 359 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 PAFAH1B3Q15102 231 aaKnown RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 TAF1AQ15573 450 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 TAF9Q16594 264 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 GUCA2BQ16661 112 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 ZNF791Q3KP31 576 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 CCSMST1Q4G0I0 132 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 DEFB134Q4QY38 66 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 TTC19Q6DKK2 380 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 H2AFVQ71UI9 128 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 VN1R4Q7Z5H5 301 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 THOC6Q86W42 341 aaKnown RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 COMMD1Q8N668 190 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 SIGLECL1Q8N7X8 197 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 SPATA4Q8NEY3 305 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 OR13C4Q8NGS5 318 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 TMIGD2Q96BF3 282 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 C10orf35Q96D05 121 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 DNAJC1Q96KC8 554 aaKnown RBP3.45□□□□□ -1.86
CPNE3-206ENST00000523469 RILPQ96NA2 401 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 TSNARE1Q96NA8 513 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 CHP1Q99653 195 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 DHRS9Q9BPW9 319 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 BEX1Q9HBH7 125 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 PARVAQ9NVD7 372 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 MMACHCQ9Y4U1 282 aa3.45□□□□□ -1.86
CPNE3-206ENST00000523469 LOC285095A0A1B0GVY8 99 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 DPRXA6NFQ7 191 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 GOLGA6L10A6NI86 522 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 ZNF879B4DU55 563 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 GOLGA6L19H0YKK7 550 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 XKRYO14609 159 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 TP53I11O14683 189 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 AKR7A2O43488 359 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 CSTAP01040 98 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 MSMBP08118 114 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 IGHV3-43DP0DP04 118 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 IGFBP3P17936 291 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 TCN1P20061 433 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 PPP1R2P41236 205 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 NDUFA8P51970 172 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 FGF8P55075 233 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 LIPEQ05469 1076 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 PRDX1Q06830 199 aaKnown RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 SCRN3Q0VDG4 424 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 SLAQ13239 276 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 TSC22D1Q15714 1073 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 DGUOKQ16854 277 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 DEFB121Q5J5C9 76 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 FAM71E1Q6IPT2 247 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 NIPAL1Q6NVV3 410 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 CDKL3Q8IVW4 592 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 Q8N976 141 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 OR1J4Q8NGS1 313 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 OR6K3Q8NGY3 331 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 OR51F2Q8NH61 342 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 ACTRT1Q8TDG2 376 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 CD300LFQ8TDQ1 290 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 MCUR1Q96AQ8 359 aa3.44□□□□□ -1.86
CPNE3-206ENST00000523469 AURKBQ96GD4 344 aaPredicted RBP3.44□□□□□ -1.86
CPNE3-206ENST00000523469 PRAP1Q96NZ9 151 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms