RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KRT36O76013 467 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 SPNP16150 400 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 ALOX5APP20292 161 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 BCL3P20749 454 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 MPZP25189 248 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 OR3A1P47881 315 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 NPBWR2P48146 333 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 RIDAP52758 137 aaKnown RBP9.1□□□□□ -0.95
SDCBP-211ENST00000523441 APOFQ13790 326 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 PNLIPRP3Q17RR3 467 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 ZNF829Q3KNS6 432 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-211ENST00000523441 CYP2R1Q6VVX0 501 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 NIPSNAP1Q9BPW8 284 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 PKIBQ9C010 78 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 GORASP2Q9H8Y8 452 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 PLEKHA1Q9HB21 404 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 MAGEL2Q9UJ55 1249 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
SDCBP-211ENST00000523441 A0A1W2PPE3 182 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 LY6LH3BQJ8 138 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 PTGFRP43088 359 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 REG1BP48304 166 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 ZNF91Q05481 1191 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 GABPB1Q06547 395 aaPredicted RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 BNIP1Q12981 228 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 GINS1Q14691 196 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 HEPN1Q6WQI6 88 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 HACD2Q6Y1H2 254 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 MOB3BQ86TA1 216 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 OR14K1Q8NGZ2 314 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 CREB3L1Q96BA8 519 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 APOL4Q9BPW4 351 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 NUFIP1Q9UHK0 495 aaKnown RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 COPS3Q9UNS2 423 aa9.09□□□□□ -0.95
SDCBP-211ENST00000523441 SAMHD1Q9Y3Z3 626 aaKnown RBP9.09□□□□□ -0.95
SDCBP-211ENST00000523441 AP4M1O00189 453 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 HSPB6O14558 160 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 RPP14O95059 124 aaKnown RBP9.08□□□□□ -0.96
SDCBP-211ENST00000523441 IGLV3-1P01715 115 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 IGHG2P01859 326 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 GP9P14770 177 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 GPR12P47775 334 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 CDX1P47902 265 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-211ENST00000523441 ATXN7L3Q14CW9 347 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-211ENST00000523441 UBE2V2Q15819 145 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 MICAQ29983 383 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 TMEM42Q69YG0 159 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 KRT74Q7RTS7 529 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 CATSPERDQ86XM0 798 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 FAM58AQ8N1B3 248 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 RFT1Q96AA3 541 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 BORCS8Q96FH0 119 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 REEP1Q9H902 201 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 OR52A1Q9UKL2 312 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 V9GYS6 101 aa9.08□□□□□ -0.96
SDCBP-211ENST00000523441 A0A1B0GTI1 187 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 A0A1W2PPI3 338 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ACOD1A6NK06 481 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 OR2H2O95918 312 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF44P15621 663 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 VDAC1P21796 283 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 GLP1RP43220 463 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 MAGEA2P43356 314 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 HMGA2P52926 109 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 KRBOX4Q5JUW0 171 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 LCN1P1Q5VSP4 162 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 TMEM236Q5W0B7 351 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 LHFPL2Q6ZUX7 228 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF679Q8IYX0 411 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 OR10G2Q8NGC3 310 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 OR9G1Q8NH87 305 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 DCUN1D4Q92564 292 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ITFG2Q969R8 447 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 PPIL3Q9H2H8 161 aaKnown RBP9.07□□□□□ -0.96
SDCBP-211ENST00000523441 GNB4Q9HAV0 340 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 EDA2RQ9HAV5 297 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 EXOSC4Q9NPD3 245 aaKnown RBP9.07□□□□□ -0.96
SDCBP-211ENST00000523441 NKX1-2Q9UD57 310 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-211ENST00000523441 AMMECR1Q9Y4X0 333 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-211ENST00000523441 SIRT4Q9Y6E7 314 aaPredicted RBP9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ALMS1Q8TCU4 4167 aa9.07□□□□□ -0.96
SDCBP-211ENST00000523441 ODAMA1E959 279 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A18PA6NE21 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A16PA6NEW6 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A20PA6NIJ5 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A9PA6NNJ1 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A12PA8MX19 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A5PA8MXJ8 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 OOSP1A8MZH6 123 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 SH2D1BO14796 132 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 PRODHO43272 600 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms