RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 BCL3P20749 454 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 CEACAM3P40198 252 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 CRISP1P54107 249 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 NKAPLQ5M9Q1 402 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 UNQ9370/PRO34162Q6UXP9 181 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 MEPCEQ7L2J0 689 aaKnown RBP17.98■□□□□ 0.47
PVT1-218ENST00000523328 SSX6Q7RTT6 188 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 CATSPERDQ86XM0 798 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 CREB3L1Q96BA8 519 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 LRGUKQ96M69 825 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 CLN6Q9NWW5 311 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 TAS2R3Q9NYW6 316 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 MOB4Q9Y3A3 225 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 LSM4Q9Y4Z0 139 aaKnown RBP17.98■□□□□ 0.47
PVT1-218ENST00000523328 HSPE1-MOB4S4R3N1 261 aa17.98■□□□□ 0.47
PVT1-218ENST00000523328 RYR2Q92736 4967 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A18PA6NE21 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A16PA6NEW6 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A20PA6NIJ5 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A9PA6NNJ1 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A12PA8MX19 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A5PA8MXJ8 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 ZNF670-ZNF695F2Z2N8 137 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 SYT7O43581 403 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A15PP0C7V4 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A13PP0C7W8 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A14PP0C7W9 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 FAM90A24PP0C7X0 464 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 CALCBP10092 127 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 LMO1P25800 156 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 SLC6A1P30531 599 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 OR3A4PP47883 348 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 SNU13P55769 128 aaKnown RBP17.97■□□□□ 0.47
PVT1-218ENST00000523328 SPIN3Q5JUX0 258 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 UTF1Q5T230 341 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 TFAP2CQ92754 450 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 CCDC124Q96CT7 223 aaKnown RBP17.97■□□□□ 0.47
PVT1-218ENST00000523328 NOL4LQ96MY1 436 aaPredicted RBP17.97■□□□□ 0.47
PVT1-218ENST00000523328 ZMAT5Q9UDW3 170 aaKnown RBP17.97■□□□□ 0.47
PVT1-218ENST00000523328 GLS2Q9UI32 602 aa17.97■□□□□ 0.47
PVT1-218ENST00000523328 DYNC2H1Q8NCM8 4307 aaKnown RBP17.96■□□□□ 0.47
PVT1-218ENST00000523328 A0A087X0M5 115 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 A0A1B0GX30 115 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 OOSP1A8MZH6 123 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 SIRPB1O00241 398 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 PRKACAP17612 351 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 GLIPR1P48060 266 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 CDC42P60953 191 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 PTGES3Q15185 160 aaKnown RBP17.96■□□□□ 0.47
PVT1-218ENST00000523328 CCDC144NLQ6NUI1 221 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 ZFP57Q9NU63 452 aa17.96■□□□□ 0.47
PVT1-218ENST00000523328 NUDT19A8MXV4 375 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 M0R129 80 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 TOR1AO14656 332 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 OR2H2O95918 312 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 MNDAP41218 407 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 POU3F4P49335 361 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 RBP2P50120 134 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 EFNB1P98172 346 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 AESQ08117 197 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 AADACL4Q5VUY2 407 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 THNSL2Q86YJ6 484 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 YIPF7Q8N8F6 280 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 KLHL30-AS1Q8NEE0 82 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 DNAAF1Q8NEP3 725 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 CHPT1Q8WUD6 406 aa17.95■□□□□ 0.46
PVT1-218ENST00000523328 IGKV1-9A0A0C4DH69 117 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 C3orf84H3BNL1 204 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 RAMP3O60896 148 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 SERPINA3P01011 423 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 FAM106CPP0CH98 169 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 ATP1B3P54709 279 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 PRRX1P54821 245 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 RBM39Q14498 530 aaKnown RBP17.94■□□□□ 0.46
PVT1-218ENST00000523328 KPNB1Q14974 876 aaKnown RBP17.94■□□□□ 0.46
PVT1-218ENST00000523328 NXNL2Q5VZ03 156 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 C5orf56Q8N8D9 126 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 CCDC54Q8NEL0 328 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 NSL1Q96IY1 281 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 HMG20AQ9NP66 347 aa17.94■□□□□ 0.46
PVT1-218ENST00000523328 FUOMA2VDF0 154 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 AQP12BA6NM10 295 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 SH2D1BO14796 132 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 KRT8P05787 483 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 SNRNP70P08621 437 aaKnown RBP17.93■□□□□ 0.46
PVT1-218ENST00000523328 PTGFRP43088 359 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 AQP12AQ8IXF9 295 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 OR4D6Q8NGJ1 314 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 DNAJC9Q8WXX5 260 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 C10orf35Q96D05 121 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 DUX3Q96PT4 197 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 EXOSC4Q9NPD3 245 aaKnown RBP17.93■□□□□ 0.46
PVT1-218ENST00000523328 H2AFY2Q9P0M6 372 aaPredicted RBP17.93■□□□□ 0.46
PVT1-218ENST00000523328 LINC00527Q9UJ94 153 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 GSTK1Q9Y2Q3 226 aa17.93■□□□□ 0.46
PVT1-218ENST00000523328 HUWE1Q7Z6Z7 4374 aaKnown RBP17.93■□□□□ 0.46
PVT1-218ENST00000523328 ODAMA1E959 279 aa17.92■□□□□ 0.46
PVT1-218ENST00000523328 ZFPL1O95159 310 aa17.92■□□□□ 0.46
PVT1-218ENST00000523328 CYB5AP00167 134 aa17.92■□□□□ 0.46
PVT1-218ENST00000523328 C17orf58Q2M2W7 97 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms