RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ZCCHC4Q9H5U6 513 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 FGF20Q9NP95 211 aaPredicted RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 INPP5EQ9NRR6 644 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 RPL36Q9Y3U8 105 aaKnown RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 TBL2Q9Y4P3 447 aaKnown RBP10□□□□□ -0.81
VEGFA-223ENST00000523125 TGP01266 2768 aa10□□□□□ -0.81
VEGFA-223ENST00000523125 TMEM212A6NML5 194 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 SIRPB1O00241 398 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 SH2D1BO14796 132 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-223ENST00000523125 GABRA5P31644 462 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 GTF2A1P52655 376 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-223ENST00000523125 P2RX3P56373 397 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 ZP1P60852 638 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 IL18R1Q13478 541 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 CDK5R1Q15078 307 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 KISS1Q15726 138 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 KLHL22Q53GT1 634 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 PLA1AQ53H76 456 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 LPCAT4Q643R3 524 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF529Q6P280 563 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 Q6P435 159 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 SERPINA12Q8IW75 414 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 OR5AK2Q8NH90 309 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 RGP1Q92546 391 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-223ENST00000523125 MYCBPQ99417 103 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-223ENST00000523125 MMP27Q9H306 513 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-223ENST00000523125 GSTK1Q9Y2Q3 226 aa9.99□□□□□ -0.81
VEGFA-223ENST00000523125 IGHV2-26A0A0B4J1V2 119 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 A0A0G2JK05 382 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 SULT1B1O43704 296 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 BAG2O95816 211 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 TSPAN15O95858 294 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 RPSAP08865 295 aaKnown RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 GLIPR1P48060 266 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 ETV1P50549 477 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 GBX2P52951 348 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 MRPL28Q13084 256 aaKnown RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 SSX2Q16385 188 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 BAIAP2L2Q6UXY1 529 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 OR5D14Q8NGL3 314 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 OR4C13Q8NGP0 309 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 RPS4Y2Q8TD47 263 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 CORO2AQ92828 525 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 FOXRED1Q96CU9 486 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 RDH12Q96NR8 316 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 TMEM133Q9H2Q1 129 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 SMPD3Q9NY59 655 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 GLS2Q9UI32 602 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 TCF19Q9Y242 345 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 UBE2J1Q9Y385 318 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-223ENST00000523125 SESN1Q9Y6P5 492 aa9.98□□□□□ -0.81
VEGFA-223ENST00000523125 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 A6NDX4 124 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CLIC3O95833 236 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CSN2P05814 226 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 HCKP08631 526 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CCDC159P0C7I6 412 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 OCM2P0CE71 109 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-223ENST00000523125 TMEM225BP0DP42 221 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 GDNFP39905 211 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 DYNLT3P51808 116 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 DEFA6Q01524 100 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 SCN1BQ07699 218 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 AESQ08117 197 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 DYNC1I2Q13409 638 aaKnown RBP9.97□□□□□ -0.81
VEGFA-223ENST00000523125 FAM189A2Q15884 450 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 MINOS1Q5TGZ0 78 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF691Q5VV52 312 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 HIST2H2BDQ6DRA6 164 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 TMEM219Q86XT9 240 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 OR51A2Q8NGJ7 313 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CNIH3Q8TBE1 160 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CFHR4Q92496 578 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 COQ2Q96H96 371 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CDCA4Q9BXL8 241 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 CLEC7AQ9BXN2 247 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 NEK6Q9HC98 313 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 RAB18Q9NP72 206 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 FOXJ3Q9UPW0 622 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 DHDHQ9UQ10 334 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 HILPDAQ9Y5L2 63 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 SIRT4Q9Y6E7 314 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-223ENST00000523125 MINOS1-NBL1R4GNA1 71 aa9.97□□□□□ -0.81
VEGFA-223ENST00000523125 HABP2Q14520 560 aaPredicted RBP9.96□□□□□ -0.82
VEGFA-223ENST00000523125 HERPUD1Q15011 391 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 CCDC58Q4VC31 144 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 OR2G6Q5TZ20 316 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 ELP2Q6IA86 826 aa9.96□□□□□ -0.82
VEGFA-223ENST00000523125 RPL22L1Q6P5R6 122 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms