RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 SLC6A7Q99884 636 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 GINS4Q9BRT9 223 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 NPDC1Q9NQX5 325 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 IGKV1D-8A0A087WSZ0 117 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 ZNF44P15621 663 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 CEBPDP49716 269 aaPredicted RBP13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 LINC00596Q86U02 117 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 SUMF2Q8NBJ7 301 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 NEK7Q8TDX7 302 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 RDH5Q92781 318 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 POM121Q96HA1 1249 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 PLEKHA6Q9Y2H5 1048 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 SIRPB1O00241 398 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 DEGS1O15121 323 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 NDUFB6O95139 128 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 CLDN14O95500 239 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 FCGR3AP08637 254 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 MEF2DQ14814 521 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 IDO2Q6ZQW0 420 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
CTNNA1-236ENST00000522792 TRAV24A0A0B4J272 114 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 DISC1C4P0D8 188 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 PRSS44E7EML9 344 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 GLRA1P23415 457 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 SERPINF1P36955 418 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 BTG1P62324 171 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 RBMS2Q15434 407 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 Q6P435 159 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 ZNF554Q86TJ5 538 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 BOLLQ8N9W6 283 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 PIK3IP1Q96FE7 263 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 CHMP1AQ9HD42 196 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 C12orf4Q9NQ89 552 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 RNF115Q9Y4L5 304 aa13.04□□□□□ -0.32
CTNNA1-236ENST00000522792 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 OR2H2O95918 312 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 DHFRP00374 187 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 TFF1P04155 84 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 IFNA6P05013 189 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 EGR1P18146 543 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 CD300CQ08708 224 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 Q6ZPA2 131 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ZCCHC24Q8N2G6 241 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 NEURL2Q9BR09 285 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 DPCDQ9BVM2 203 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 VSTM5A8MXK1 200 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ANXA7P20073 488 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 TBPP20226 339 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 DTYMKP23919 212 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 PMELP40967 661 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 FIP1L1Q6UN15 594 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ACP7Q6ZNF0 438 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 FN3KRPQ9HA64 309 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ING3Q9NXR8 418 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 TREM2Q9NZC2 230 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 SCP2D1Q9UJQ7 156 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 ZDHHC8Q9ULC8 765 aa13.03□□□□□ -0.32
CTNNA1-236ENST00000522792 HCFC1P51610 2035 aa13.02□□□□□ -0.32
CTNNA1-236ENST00000522792 CHD3Q12873 2000 aaKnown RBP13.02□□□□□ -0.32
CTNNA1-236ENST00000522792 A0A0A6YYJ9 748 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 DEFB108AA8MXU0 73 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 PEX14O75381 377 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 HAND1O96004 215 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 TNFSF4P23510 183 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 OR3A3P47888 321 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 ZNF146Q15072 292 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 ACTBL2Q562R1 376 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 ZNF808Q8N4W9 903 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 OR13C8Q8NGS7 320 aa13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-236ENST00000522792 B8ZZF3 427 aa13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 M0R233 179 aa13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 SLC33A1O00400 549 aaPredicted RBP13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 SH2D1BO14796 132 aa13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 RLN1P04808 185 aa13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 TAS2R46P59540 309 aa13.01□□□□□ -0.33
CTNNA1-236ENST00000522792 ARPC4P59998 168 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms