RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NRAPQ86VF7 1730 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 TNS1Q9HBL0 1735 aaKnown RBP2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 RNASEK-C17orf49H0YIS7 233 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 NDUFS5O43920 106 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 GATBO75879 557 aaKnown RBP2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 IL1RNP18510 177 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 ARR3P36575 388 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 GPR176Q14439 515 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 SHHQ15465 462 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 COX19Q49B96 90 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 CLLU1OSQ5K130 101 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 HHATQ5VTY9 493 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 FAM104BQ5XKR9 115 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 Q6ZSR6 202 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 NT5DC3Q86UY8 548 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 NELFCDQ8IXH7 590 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 TMEM239Q8WW34 195 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 HGDQ93099 445 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 MRPL48Q96GC5 212 aaKnown RBP2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 IP6K3Q96PC2 410 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 CDX2Q99626 313 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 TMED9Q9BVK6 235 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 C6orf50Q9HD87 102 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 C12orf4Q9NQ89 552 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 NRBP2Q9NSY0 501 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 SDHAF2Q9NX18 166 aa2.59□□□□□ -1.99
HMGB1P1-201ENST00000522557 PPLO60437 1756 aa2.59□□□□□ -2
HMGB1P1-201ENST00000522557 MIA3Q5JRA6 1907 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 PDE4DIPQ5VU43 2346 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 GPR179Q6PRD1 2367 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 EP400Q96L91 3159 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 RREB1Q92766 1687 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ALS2Q96Q42 1657 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 KIR2DS1A0A191URI9 304 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 A0A1B0GXF2 115 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 IQCF5A8MTL0 148 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 NPPAP01160 153 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 IGKV2D-28P01615 120 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 RPN2P04844 631 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CD9P21926 228 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CASQ1P31415 396 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 DEKP35659 375 aaKnown RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 TNNC1P63316 161 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 XRCC4Q13426 336 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 LUZP6Q538Z0 58 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CLEC6AQ6EIG7 209 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 PRNTQ86SH4 94 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF555Q8NEP9 628 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 OR4M2Q8NGB6 313 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 OR4D6Q8NGJ1 314 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 OR5M1Q8NGP8 315 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 UBA3Q8TBC4 463 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 OR5P2Q8WZ92 322 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 Q96MT0 163 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 RILPQ96NA2 401 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CTRCQ99895 268 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ASB7Q9H672 318 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 VCX3AQ9NNX9 186 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ANXA10Q9UJ72 324 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ORC6Q9Y5N6 252 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 TRPM3Q9HCF6 1732 aaPredicted RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 CASZ1Q86V15 1759 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 ROCK2O75116 1388 aaKnown RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 RAB3GAP2Q9H2M9 1393 aa2.58□□□□□ -2
HMGB1P1-201ENST00000522557 SMG6Q86US8 1419 aaKnown RBP2.58□□□□□ -2
HMGB1P1-201ENST00000522557 SHANK3Q9BYB0 1731 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 SCN4AP35499 1836 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 IGLV3-12A0A075B6K2 115 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 IGHV3OR16-8A0A075B7F1 116 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 A0A1B0GW15 77 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 TMEM150BA6NC51 233 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 CENPBD1B2RD01 187 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 HSBP1L1C9JCN9 74 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 OR7C2O60412 319 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 SHOX2O60902 331 aaPredicted RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 FADS2O95864 444 aaKnown RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 HSPD1P10809 573 aaKnown RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 CELP19835 753 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 CD151P48509 253 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 IL5RAQ01344 420 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF678Q5SXM1 525 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 CLEC19AQ6UXS0 136 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 ORMDL3Q8N138 153 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF615Q8N8J6 731 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 OR2Z1Q8NG97 314 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 OR51Q1Q8NH59 317 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 KLF14Q8TD94 323 aaPredicted RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 DOK4Q8TEW6 326 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 MS4A8Q9BY19 250 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 SLC38A1Q9H2H9 487 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 WDR55Q9H6Y2 383 aaPredicted RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 OR2S2Q9NQN1 319 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 MARCOQ9UEW3 520 aaPredicted RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 KLF13Q9Y2Y9 288 aaPredicted RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 PLXNB3Q9ULL4 1909 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 CD163L1Q9NR16 1453 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 KCPQ6ZWJ8 1503 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms