RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MAP2K4P45985 399 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 ACTG1P63261 375 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 GRK1Q15835 563 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 PIGYQ3MUY2 71 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 SPIN3Q5JUX0 258 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 CYYR1Q96J86 154 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 SNX22Q96L94 193 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 DMRTB1Q96MA1 342 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 DERL3Q96Q80 235 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 GPER1Q99527 375 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 MND1Q9BWT6 205 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 PPA2Q9H2U2 334 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 PRDM13Q9H4Q3 707 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 METTL8Q9H825 291 aaKnown RBP14.59□□□□□ -0.07
CLK4-211ENST00000522556 EXOSC4Q9NPD3 245 aaKnown RBP14.59□□□□□ -0.07
CLK4-211ENST00000522556 SCN3BQ9NY72 215 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 STAB1Q9NY15 2570 aa14.59□□□□□ -0.07
CLK4-211ENST00000522556 A0A1W2PP11 408 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 NPFFO15130 113 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 FSTP19883 344 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 COX7A1P24310 79 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 BDKRB2P30411 391 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 SAA4P35542 130 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 BMXP51813 675 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 GP2P55259 537 aaKnown RBP14.58□□□□□ -0.08
CLK4-211ENST00000522556 PPP3R1P63098 170 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 SCN1BQ07699 218 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 RNLSQ5VYX0 342 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 Q6YL49 198 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 ZSCAN4Q8NAM6 433 aaPredicted RBP14.58□□□□□ -0.08
CLK4-211ENST00000522556 PXT1Q8NFP0 134 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 ZFAND2BQ8WV99 257 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 MYDGFQ969H8 173 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 ZDHHC16Q969W1 377 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 AJUBAQ96IF1 538 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 NR1H4Q96RI1 486 aaPredicted RBP14.58□□□□□ -0.08
CLK4-211ENST00000522556 ZNF184Q99676 751 aaPredicted RBP14.58□□□□□ -0.08
CLK4-211ENST00000522556 UNKLQ9H9P5 680 aaKnown RBP14.58□□□□□ -0.08
CLK4-211ENST00000522556 NOX4Q9NPH5 578 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 TMEM138Q9NPI0 162 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 ING3Q9NXR8 418 aa14.58□□□□□ -0.08
CLK4-211ENST00000522556 SLC33A1O00400 549 aaPredicted RBP14.57□□□□□ -0.08
CLK4-211ENST00000522556 HSPB6O14558 160 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 IGHV4-59P01825 116 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 ALDOBP05062 364 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 ZNF44P15621 663 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 VHLP40337 213 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 ACSM1Q08AH1 577 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 SPHARQ15513 63 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 MED22Q15528 200 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 FIP1L1Q6UN15 594 aaKnown RBP14.57□□□□□ -0.08
CLK4-211ENST00000522556 COQ2Q96H96 371 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 TMED9Q9BVK6 235 aa14.57□□□□□ -0.08
CLK4-211ENST00000522556 SEBOXQ9HB31 216 aaPredicted RBP14.57□□□□□ -0.08
CLK4-211ENST00000522556 KIAA2026Q5HYC2 2103 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 A0A0G2JK05 382 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 C17orf98A8MV24 154 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 RGS10O43665 173 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 GPX5O75715 221 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 MMP23AO75900 390 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 HTR3BO95264 441 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 MAS1P04201 325 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 RNASE1P07998 156 aaKnown RBP14.56□□□□□ -0.08
CLK4-211ENST00000522556 ZNF93P35789 620 aaPredicted RBP14.56□□□□□ -0.08
CLK4-211ENST00000522556 TGFBR2P37173 567 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 PTGFRP43088 359 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 GLIPR1P48060 266 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 HSPA13P48723 471 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 BPIFB3P59826 476 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 BDH1Q02338 343 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 BLMHQ13867 455 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 ELP2Q6IA86 826 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 BAIAP2L2Q6UXY1 529 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 ASCL4Q6XD76 172 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 C1orf122Q6ZSJ8 110 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 CHIAQ9BZP6 476 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 CCDC90BQ9GZT6 254 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 PPIL3Q9H2H8 161 aaKnown RBP14.56□□□□□ -0.08
CLK4-211ENST00000522556 TPRKBQ9Y3C4 175 aa14.56□□□□□ -0.08
CLK4-211ENST00000522556 MEIOCA2RUB1 952 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 SH2D1BO14796 132 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 MAGEB3O15480 346 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 CD1AP06126 327 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 LMO1P25800 156 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 MTNR1BP49286 362 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 UBE2E1P51965 193 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 P2RX3P56373 397 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 GUCA2AQ02747 115 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 AESQ08117 197 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 ATXN7L3Q14CW9 347 aaPredicted RBP14.55□□□□□ -0.08
CLK4-211ENST00000522556 LIPKQ5VXJ0 399 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 NCR3LG1Q68D85 454 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 LYPD6Q86Y78 171 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 MUL1Q969V5 352 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 RAB26Q9ULW5 256 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 ING4Q9UNL4 249 aa14.55□□□□□ -0.08
CLK4-211ENST00000522556 RRP15Q9Y3B9 282 aaKnown RBP14.55□□□□□ -0.08
CLK4-211ENST00000522556 TRAV24A0A0B4J272 114 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 TMEM89A2RUT3 159 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms