RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SMIM4Q8WVI0 70 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 ABHD1Q96SE0 405 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 AUNIPQ9H7T9 357 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 SCPEP1Q9HB40 452 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 GLS2Q9UI32 602 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 FBN2P35556 2912 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 SERPINE3A8MV23 424 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 TMEM178BH3BS89 294 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 GABARAPH6UMI1 98 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 J3QRK9 145 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 OVOL3O00110 214 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 SULT1C2O00338 296 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 WNT9BO14905 357 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 FSTL3O95633 263 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 GLAP06280 429 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 FUT3P21217 361 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 COL8A1P27658 744 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 SSTR2P30874 369 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 TMEM50BP56557 158 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 IKZF1Q13422 519 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 PNLIPRP3Q17RR3 467 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 PLAC9Q5JTB6 97 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 TEX36Q5VZQ5 186 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 SIGIRRQ6IA17 410 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 DNM1P46Q6ZS02 220 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 Q6ZTK2 550 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 DTX3Q8N9I9 347 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 CHST4Q8NCG5 386 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 ST8SIA4Q92187 359 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 ARHGAP5-AS1Q96IT6 56 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 SDHCQ99643 169 aaPredicted RBP10.97□□□□□ -0.65
CPNE3-205ENST00000522240 PECRQ9BY49 303 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 DLL4Q9NR61 685 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 DNAJB11Q9UBS4 358 aa10.97□□□□□ -0.65
CPNE3-205ENST00000522240 MRPS7Q9Y2R9 242 aaKnown RBP10.97□□□□□ -0.65
CPNE3-205ENST00000522240 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
CPNE3-205ENST00000522240 LGALS8O00214 317 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 SH2D1BO14796 132 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 RP2O75695 350 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 HAND1O96004 215 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 CYB5R3P00387 301 aaPredicted RBP10.96□□□□□ -0.65
CPNE3-205ENST00000522240 MUC1P15941 1255 aaPredicted RBP10.96□□□□□ -0.65
CPNE3-205ENST00000522240 CD80P33681 288 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 PRSS3P35030 304 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 SNU13P55769 128 aaKnown RBP10.96□□□□□ -0.65
CPNE3-205ENST00000522240 MADCAM1Q13477 382 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 HFEQ30201 348 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 CDNFQ49AH0 187 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
CPNE3-205ENST00000522240 Q6P435 159 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 SNX29P2Q8IUI4 249 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 Q8N402 240 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 ZFAND2BQ8WV99 257 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 RDH5Q92781 318 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 CCL19Q99731 98 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 CXorf56Q9H5V9 222 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
CPNE3-205ENST00000522240 TACC2O95359 2948 aa10.96□□□□□ -0.66
CPNE3-205ENST00000522240 CCDC168Q8NDH2 2452 aa10.96□□□□□ -0.66
CPNE3-205ENST00000522240 DYSFO75923 2080 aa10.96□□□□□ -0.66
CPNE3-205ENST00000522240 F8P00451 2351 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 TMEM235A6NFC5 223 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 OOEPA6NGQ2 149 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 UPK1BO75841 260 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 OR2H2O95918 312 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 LPLP06858 475 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF44P15621 663 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 GNB3P16520 340 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 LMO1P25800 156 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 GMFBP60983 142 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
CPNE3-205ENST00000522240 DCTN2Q13561 401 aaKnown RBP10.95□□□□□ -0.66
CPNE3-205ENST00000522240 NKAPLQ5M9Q1 402 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 HACD4Q5VWC8 232 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 STUMQ69YW2 141 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 C6orf201Q7Z4U5 140 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 GPX8Q8TED1 209 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 CCL17Q92583 94 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 YIPF5Q969M3 257 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 DNTTIP1Q9H147 329 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF581Q9P0T4 197 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF222Q9UK12 451 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 KCNK7Q9Y2U2 307 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 CACNG2Q9Y698 323 aa10.95□□□□□ -0.66
CPNE3-205ENST00000522240 DSCAMO60469 2012 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 MTORP42345 2549 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 PPIAL4EA0A075B759 164 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 TRAV38-1A0A0B4J264 116 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 PPIAL4DF5H284 164 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 DEGS1O15121 323 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 CSF3P09919 207 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms