RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BIVMQ86UB2 503 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 FAM216BQ8N7L0 139 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 POM121Q96HA1 1249 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 SLIRPQ9GZT3 109 aaKnown RBP20.13■□□□□ 0.81
PVT1-212ENST00000521951 MYO9AB2RTY4 2548 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 A0A0A6YYD4 124 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A10PA6NDY2 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A18PA6NE21 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A16PA6NEW6 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A20PA6NIJ5 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 NKX6-3A6NJ46 265 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A8PA6NJQ4 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A7PA6NKC0 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A22PA8MWA6 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A12PA8MX19 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A5PA8MXJ8 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A23PA8MXZ1 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 SIRPB1O00241 398 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 OR7C1O76099 320 aaPredicted RBP20.12■□□□□ 0.81
PVT1-212ENST00000521951 WNT2P09544 360 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A15PP0C7V4 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A13PP0C7W8 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A14PP0C7W9 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM90A24PP0C7X0 464 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 ZNF44P15621 663 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 RPS2P15880 293 aaKnown RBP20.12■□□□□ 0.81
PVT1-212ENST00000521951 LMO4P61968 165 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 SLC36A1Q7Z2H8 476 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 FAM89BQ8N5H3 189 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 MED30Q96HR3 178 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 CTSZQ9UBR2 303 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 DOCK11Q5JSL3 2073 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 A0A096LNT2 108 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 F5H0A9 414 aaPredicted RBP20.12■□□□□ 0.81
PVT1-212ENST00000521951 SIGLEC5O15389 551 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 IGHV2-5P01817 119 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 SELLP14151 372 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 USF1P22415 310 aaPredicted RBP20.12■□□□□ 0.81
PVT1-212ENST00000521951 CPT2P23786 658 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 LMO1P25800 156 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 IL13RA1P78552 427 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 SIGIRRQ6IA17 410 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 MZT2AQ6P582 158 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 ZNF561Q8N587 486 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 ZNRF1Q8ND25 227 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 SLC25A38Q96DW6 304 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 REG4Q9BYZ8 158 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 IFT22Q9H7X7 185 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 RHBDL2Q9NX52 303 aa20.12■□□□□ 0.81
PVT1-212ENST00000521951 AKAP9Q99996 3911 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 TMEM82A0PJX8 343 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 RNF223E7ERA6 249 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 VEGFCP49767 419 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 SAMD12Q8N8I0 201 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 NEIL1Q96FI4 390 aaPredicted RBP20.11■□□□□ 0.81
PVT1-212ENST00000521951 ATG5Q9H1Y0 275 aa20.11■□□□□ 0.81
PVT1-212ENST00000521951 MED13LQ71F56 2210 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 TRAV24A0A0B4J272 114 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 SLC33A1O00400 549 aaPredicted RBP20.1■□□□□ 0.81
PVT1-212ENST00000521951 SOCS1O15524 211 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 ZNF737O75373 536 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 FCN3O75636 299 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 PITPNBP48739 271 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 ATAD3CQ5T2N8 411 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 ZNF841Q6ZN19 808 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 ASCC1Q8N9N2 400 aaKnown RBP20.1■□□□□ 0.81
PVT1-212ENST00000521951 CHST4Q8NCG5 386 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 OR8B3Q8NGG8 313 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 OR8B2Q96RD0 313 aa20.1■□□□□ 0.81
PVT1-212ENST00000521951 NXF2Q9GZY0 626 aaKnown RBP20.1■□□□□ 0.81
PVT1-212ENST00000521951 A0A075B6Q4 140 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 METTL21EPA6NDL7 271 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 PSPNO60542 156 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 IL2RGP31785 369 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 FAM189A2Q15884 450 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 C17orf107Q6ZR85 190 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 NLRC3Q7RTR2 1065 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 MCFD2Q8NI22 146 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 SNX22Q96L94 193 aa20.09■□□□□ 0.81
PVT1-212ENST00000521951 K7N7A8 449 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 HPGDSO60760 199 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 FUT3P21217 361 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 BLVRBP30043 206 aaPredicted RBP20.08■□□□□ 0.81
PVT1-212ENST00000521951 SEC61A1P61619 476 aaKnown RBP20.08■□□□□ 0.81
PVT1-212ENST00000521951 LOXL1Q08397 574 aaPredicted RBP20.08■□□□□ 0.81
PVT1-212ENST00000521951 CNPY1Q3B7I2 92 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 MOGAT2Q3SYC2 334 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 UBE2NLQ5JXB2 153 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 BRICD5Q6PL45 260 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 CMTM4Q8IZR5 234 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 FGFRL1Q8N441 504 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 SUMF2Q8NBJ7 301 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 TMEM185AQ8NFB2 350 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 OR56B1Q8NGI3 324 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 RAB39BQ96DA2 213 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 SHARPINQ9H0F6 387 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 ABCG5Q9H222 651 aa20.08■□□□□ 0.81
PVT1-212ENST00000521951 RCC2Q9P258 522 aaKnown RBP20.08■□□□□ 0.81
PVT1-212ENST00000521951 MALRD1Q5VYJ5 2156 aa20.08■□□□□ 0.8
PVT1-212ENST00000521951 ITPR3Q14573 2671 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms