RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TTC23Q5W5X9 447 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 LPCAT4Q643R3 524 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 LINC00322Q6ZN03 302 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RNF165Q6ZSG1 346 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 HMGN2P46Q86SG4 172 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MAPKAPK5-AS1Q8N8E1 139 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ANKFN1Q8N957 763 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 SPERTQ8NA61 448 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 BHLHE23Q8NDY6 225 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 OR13C5Q8NGS8 318 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 C8orf46Q8TAG6 207 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RHEBL1Q8TAI7 183 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 C11orf40Q8WZ69 217 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 BORCS5Q969J3 196 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ROPN1LQ96C74 230 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 SLC25A36Q96CQ1 311 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 CCDC124Q96CT7 223 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ZHX1-C8orf76Q96EF9 292 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 PHF21BQ96EK2 531 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 NRBF2Q96F24 287 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MS4A4EQ96PG1 132 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 OR2V2Q96R30 315 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 SORT1Q99523 831 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 HOPXQ9BPY8 73 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 BCL7BQ9BQE9 202 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 EBF4Q9BQW3 602 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 NDUFAF3Q9BU61 184 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ANKRD60Q9BZ19 345 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 CSTL1Q9H114 145 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 NMRAL1Q9HBL8 299 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RETNQ9HD89 108 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 EXOSC3Q9NQT5 275 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ARMC1Q9NVT9 282 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 AHSPQ9NZD4 102 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF319Q9P2F9 582 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ERVK-18Q9QC07 812 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 VPS29Q9UBQ0 182 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 CLN8Q9UBY8 286 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MARCOQ9UEW3 520 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 EMCNQ9ULC0 261 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 FAF1Q9UNN5 650 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 DIMT1Q9UNQ2 313 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 PPP1R3CQ9UQK1 317 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF256Q9Y2P7 627 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 TSSC4Q9Y5U2 329 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 KPTNQ9Y664 436 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 IGKV1D-42A0A075B6H8 117 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 A0A1B0GVG6 124 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FAM240BA0A1B0GVZ2 78 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TCRBV3S1A0A5B6 114 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TCRBV4S1A1TA0A5B7 111 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 MFSD2BA6NFX1 497 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 SUPT3HB4E1H0 165 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 M0R3G1 203 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FAAHO00519 579 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 ACOT8O14734 319 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 AIM2O14862 343 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 E2F6O75461 281 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 SUPT3HO75486 399 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 CDK2AP2O75956 126 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 NPPAP01160 153 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 THY1P04216 161 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 GPIP06744 558 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 GUSBP08236 651 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF735P0CB33 412 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 UMPSP11172 480 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TSPAN8P19075 237 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 KITLGP21583 273 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FKBP2P26885 142 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 CDKN2AP42771 156 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 IDH2P48735 452 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 CEBPDP49716 269 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 RAB13P51153 203 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 HERV-K104P61576 105 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 C2orf80Q0P641 193 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 MAB21L1Q13394 359 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 SELPLGQ14242 412 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 RBM39Q14498 530 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 MOGQ16653 247 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 LRRC36Q1X8D7 754 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 LHFPL4Q7Z7J7 247 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 SLC22A9Q8IVM8 553 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 SLC22A24Q8N4F4 322 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FAM89BQ8N5H3 189 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FAM71E2Q8N5Q1 922 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 COX18Q8N8Q8 333 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 OR8B3Q8NGG8 313 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 OR5D16Q8NGK9 328 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 OR13C3Q8NGS6 347 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 AKR7LQ8NHP1 331 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF671Q8TAW3 534 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 STAG3L4Q8TBR4 150 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TRMT10AQ8TBZ6 339 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TMEM37Q8WXS4 190 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TMEM234Q8WY98 164 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 EMG1Q92979 244 aaKnown RBP2.92□□□□□ -1.94
VPS13B-208ENST00000521037 TMEM54Q969K7 222 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 FCRL1Q96LA6 429 aa2.92□□□□□ -1.94
VPS13B-208ENST00000521037 CXorf58Q96LI9 332 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms