RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ZNF17P17021 662 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 ELOBQ15370 118 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 Q6ZS52 159 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 DEFB126Q9BYW3 111 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 PLEKHF2Q9H8W4 249 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 TMED3Q9Y3Q3 217 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 HBE1P02100 147 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 PATE4P0C8F1 98 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 PMELP40967 661 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 FRZBQ92765 325 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 OXGR1Q96P68 337 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 KIAA1456Q9P272 454 aa11.18□□□□□ -0.62
TRAPPC9-208ENST00000520857 C3orf85A0A1B0GTC6 90 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 K7N7A8 449 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 NR2C1P13056 603 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 NDUFB7P17568 137 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 G0S2P27469 103 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 EFNA3P52797 238 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 HIKESHIQ53FT3 197 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF385CQ66K41 422 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 GPR137CQ8N3F9 429 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 SMOC1Q9H4F8 434 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 BCO1Q9HAY6 547 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 B3GAT1Q9P2W7 334 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 CACNA1DQ01668 2161 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 IGSF23A1L1A6 192 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF814B7Z6K7 855 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 TK1P04183 234 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 SUCLG1P53597 346 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 NKAIN1Q4KMZ8 207 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 PLXDC1Q8IUK5 500 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 IL22RA1Q8N6P7 574 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 MALSU1Q96EH3 234 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 GNPNAT1Q96EK6 184 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 LIME1Q9H400 295 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 CA14Q9ULX7 337 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 NUP210LQ5VU65 1888 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF407Q9C0G0 2248 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 IGKV3D-11A0A0A0MRZ8 115 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 CLDN34H7C241 214 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 PTBP3O95758 552 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 PKIAP61925 76 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 TESK1Q15569 626 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 NAT6Q93015 286 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 GALNT14Q96FL9 552 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 MRGPRX4Q96LA9 322 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 LAMP3Q9UQV4 416 aa11.17□□□□□ -0.62
TRAPPC9-208ENST00000520857 TRAF3IP2O43734 574 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 DLX2Q07687 328 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 CNN3Q15417 329 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 BOD1Q96IK1 185 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 P4HTMQ9NXG6 502 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 HMGB3O15347 200 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 DUX1O43812 170 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 POU2F2P09086 479 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 CD38P28907 300 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF787Q6DD87 383 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 PHOSPHO2Q8TCD6 241 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 MVB12AQ96EY5 273 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 OR5B12Q96R08 314 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 A0A1W2PPC4 97 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 CHST1O43916 411 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 EFNA2O43921 213 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 SPINK2P20155 84 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 S100GP29377 79 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 FASLGP48023 281 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 SHBQ15464 509 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 OR5L2Q8NGL0 311 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 Q96M66 194 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 MRPL13Q9BYD1 178 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 PLK3Q9H4B4 646 aa11.16□□□□□ -0.62
TRAPPC9-208ENST00000520857 MPPED1O15442 326 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 CNOT4O95628 575 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 SERPINE2P07093 398 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 REC114Q7Z4M0 266 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 PRR18Q8N4B5 295 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 OR6X1Q8NH79 312 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 LYPD6BQ8NI32 183 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF665Q9H7R5 613 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms