RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 IGSF11Q5DX21 431 aa8.79□□□□□ -1
MCF2-209ENST00000520602 LINC00052Q96N35 136 aa8.79□□□□□ -1
MCF2-209ENST00000520602 CLCC1Q96S66 551 aa8.79□□□□□ -1
MCF2-209ENST00000520602 ADAT1Q9BUB4 502 aaKnown RBP8.79□□□□□ -1
MCF2-209ENST00000520602 OR2J1Q9GZK6 312 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
MCF2-209ENST00000520602 WASF3Q9UPY6 502 aa8.79□□□□□ -1
MCF2-209ENST00000520602 LIPGQ9Y5X9 500 aa8.79□□□□□ -1
MCF2-209ENST00000520602 CTSDP07339 412 aaPredicted RBP8.79□□□□□ -1
MCF2-209ENST00000520602 LHX2P50458 406 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PPT1P50897 306 aa8.79□□□□□ -1
MCF2-209ENST00000520602 B3GALT5-AS1P59052 145 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PPP1CBP62140 327 aa8.79□□□□□ -1
MCF2-209ENST00000520602 LYZL2Q7Z4W2 148 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PLPPR2Q96GM1 343 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PRRX2Q99811 253 aa8.79□□□□□ -1
MCF2-209ENST00000520602 NAA60Q9H7X0 242 aa8.79□□□□□ -1
MCF2-209ENST00000520602 SLC2A9Q9NRM0 540 aa8.79□□□□□ -1
MCF2-209ENST00000520602 SLC2A8Q9NY64 477 aa8.79□□□□□ -1
MCF2-209ENST00000520602 ERRFI1Q9UJM3 462 aaPredicted RBP8.79□□□□□ -1
MCF2-209ENST00000520602 CDX4O14627 284 aaPredicted RBP8.78□□□□□ -1
MCF2-209ENST00000520602 SYNGR1O43759 233 aa8.78□□□□□ -1
MCF2-209ENST00000520602 CTSSP25774 331 aa8.78□□□□□ -1
MCF2-209ENST00000520602 PRSS54Q6PEW0 395 aa8.78□□□□□ -1
MCF2-209ENST00000520602 OVCH2Q7RTZ1 564 aa8.78□□□□□ -1
MCF2-209ENST00000520602 ZNF808Q8N4W9 903 aaPredicted RBP8.78□□□□□ -1
MCF2-209ENST00000520602 OR8U1Q8NH10 309 aa8.78□□□□□ -1
MCF2-209ENST00000520602 FAM213BQ8TBF2 198 aa8.78□□□□□ -1
MCF2-209ENST00000520602 OR10C1Q96KK4 312 aa8.78□□□□□ -1
MCF2-209ENST00000520602 OR5AC2Q9NZP5 309 aa8.78□□□□□ -1
MCF2-209ENST00000520602 TINAGQ9UJW2 476 aa8.78□□□□□ -1
MCF2-209ENST00000520602 PROCRQ9UNN8 238 aa8.78□□□□□ -1
MCF2-209ENST00000520602 MPTX1A8MV57 137 aa8.78□□□□□ -1
MCF2-209ENST00000520602 H3BP45 60 aa8.78□□□□□ -1
MCF2-209ENST00000520602 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
MCF2-209ENST00000520602 SSSCA1O60232 199 aa8.78□□□□□ -1
MCF2-209ENST00000520602 B3GALNT1O75752 331 aa8.78□□□□□ -1
MCF2-209ENST00000520602 CCL1P22362 96 aa8.78□□□□□ -1
MCF2-209ENST00000520602 CLDN18P56856 261 aa8.78□□□□□ -1
MCF2-209ENST00000520602 SRPXP78539 464 aa8.78□□□□□ -1
MCF2-209ENST00000520602 ZNF169Q14929 603 aaPredicted RBP8.78□□□□□ -1
MCF2-209ENST00000520602 RPL7L1Q6DKI1 246 aaKnown RBP8.78□□□□□ -1
MCF2-209ENST00000520602 FDCSPQ8NFU4 85 aa8.78□□□□□ -1
MCF2-209ENST00000520602 OR1S2Q8NGQ3 325 aa8.78□□□□□ -1
MCF2-209ENST00000520602 GLYATL2Q8WU03 294 aa8.78□□□□□ -1
MCF2-209ENST00000520602 LRRC46Q96FV0 321 aa8.78□□□□□ -1
MCF2-209ENST00000520602 PIGMQ9H3S5 423 aa8.78□□□□□ -1
MCF2-209ENST00000520602 MED13Q9UHV7 2174 aa8.78□□□□□ -1
MCF2-209ENST00000520602 hCG_38984A0A1B0GV85 526 aa8.78□□□□□ -1
MCF2-209ENST00000520602 MED19A0JLT2 244 aaPredicted RBP8.78□□□□□ -1
MCF2-209ENST00000520602 TUBAL3A6NHL2 446 aa8.78□□□□□ -1
MCF2-209ENST00000520602 H7C2Y5 167 aa8.78□□□□□ -1
MCF2-209ENST00000520602 SH2D1BO14796 132 aa8.78□□□□□ -1
MCF2-209ENST00000520602 SIGLEC5O15389 551 aa8.78□□□□□ -1
MCF2-209ENST00000520602 PPYP01298 95 aa8.78□□□□□ -1
MCF2-209ENST00000520602 CTXN2P0C2S0 81 aa8.78□□□□□ -1
MCF2-209ENST00000520602 NAT2P11245 290 aa8.78□□□□□ -1
MCF2-209ENST00000520602 NTF4P34130 210 aa8.78□□□□□ -1
MCF2-209ENST00000520602 LY6G6FQ5SQ64 297 aa8.78□□□□□ -1
MCF2-209ENST00000520602 STX12Q86Y82 276 aa8.78□□□□□ -1
MCF2-209ENST00000520602 SLC38A6Q8IZM9 456 aa8.78□□□□□ -1
MCF2-209ENST00000520602 SUCNR1Q9BXA5 334 aa8.78□□□□□ -1
MCF2-209ENST00000520602 FAM212BQ9NTI7 297 aaPredicted RBP8.78□□□□□ -1
MCF2-209ENST00000520602 LRP4O75096 1905 aa8.78□□□□□ -1
MCF2-209ENST00000520602 EYSQ5T1H1 3165 aa8.78□□□□□ -1
MCF2-209ENST00000520602 FREM1Q5H8C1 2179 aa8.77□□□□□ -1
MCF2-209ENST00000520602 IGKV1D-8A0A087WSZ0 117 aa8.77□□□□□ -1
MCF2-209ENST00000520602 MSTNO14793 375 aa8.77□□□□□ -1
MCF2-209ENST00000520602 IL2RAP01589 272 aa8.77□□□□□ -1
MCF2-209ENST00000520602 ZNF708P17019 499 aa8.77□□□□□ -1
MCF2-209ENST00000520602 ANOS1P23352 680 aa8.77□□□□□ -1
MCF2-209ENST00000520602 FOXO1Q12778 655 aa8.77□□□□□ -1
MCF2-209ENST00000520602 SURF2Q15527 256 aaPredicted RBP8.77□□□□□ -1
MCF2-209ENST00000520602 ABLIM2Q6H8Q1 611 aa8.77□□□□□ -1
MCF2-209ENST00000520602 LILRB2Q8N423 598 aa8.77□□□□□ -1
MCF2-209ENST00000520602 NMES1Q9C002 83 aa8.77□□□□□ -1
MCF2-209ENST00000520602 FAM234AQ9H0X4 552 aa8.77□□□□□ -1
MCF2-209ENST00000520602 PLK3Q9H4B4 646 aa8.77□□□□□ -1
MCF2-209ENST00000520602 HEXA-AS1Q9H8Q6 139 aa8.77□□□□□ -1
MCF2-209ENST00000520602 TMEM100Q9NV29 134 aa8.77□□□□□ -1
MCF2-209ENST00000520602 ESPL1Q14674 2120 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 CADP27708 2225 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 E5RGE8 158 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 NME2P1O60361 137 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 CST7O76096 145 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 DTYMKP23919 212 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 EDDM3BP56851 147 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 AKR1C8PQ5T2L2 129 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 ZNF552Q9H707 407 aaPredicted RBP8.77□□□□□ -1.01
MCF2-209ENST00000520602 GNG12Q9UBI6 72 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 NSG2Q9Y328 171 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 APC2O95996 2303 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 B8ZZF3 427 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 GPR31O00270 319 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 JTBO76095 146 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 CHATP28329 748 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 CD80P33681 288 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 PTGER4P35408 488 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 QRFPP83859 136 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms