RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CCDC112Q8NEF3 446 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 OR6K2Q8NGY2 324 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 OR52P1PQ8NH57 321 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 OTUB2Q96DC9 234 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 RNF5Q99942 180 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 FOXC2Q99958 501 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 ELOVL6Q9H5J4 265 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 ZNF442Q9H7R0 627 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 LYRM4Q9HD34 91 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 CLN8Q9UBY8 286 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 GGA2Q9UJY4 613 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 RAB23Q9ULC3 237 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 HEY1Q9Y5J3 304 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 TMEM14AQ9Y6G1 99 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 HEATR5BQ9P2D3 2071 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 SCN3AQ9NY46 2000 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 CELSR1Q9NYQ6 3014 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 SEC16AO15027 2179 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 PTPRBP23467 1997 aa2.49□□□□□ -2.01
CTNNA1-222ENST00000520400 CRYBG3Q68DQ2 2970 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 UTP20O75691 2785 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 SPTBN1Q01082 2364 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 IGKV1-27A0A075B6S5 117 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 KCNE1BA0A087WTH5 132 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 IGHV1OR15-9A0A0B4J2B8 117 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 H7C0C1 242 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 BPY2O14599 106 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CST8O60676 142 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 FCN3O75636 299 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 KRT7P08729 469 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 OR56A5P0C7T3 313 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 PGA5P0DJD9 388 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ANXA8P13928 327 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 RAB4AP20338 218 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CSRP1P21291 193 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 USF1P22415 310 aaPredicted RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 DTYMKP23919 212 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 NPY1RP25929 384 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 PCK1P35558 622 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 POLR2IP36954 125 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CXCL12P48061 93 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 PSMD8P48556 350 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 RHOAP61586 193 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 GNG11P61952 73 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 GNA12Q03113 381 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 RBMY1FQ15415 496 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 TRMT5Q32P41 509 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ANXA8L1Q5VT79 327 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 NCBP2-AS2Q69YL0 99 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 SPESP1Q6UW49 350 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 SHISA6Q6ZSJ9 500 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 MRPL55Q7Z7F7 128 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 NT5DC3Q86UY8 548 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 NKAIN4Q8IVV8 208 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 H1FOOQ8IZA3 346 aaPredicted RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 STK40Q8N2I9 435 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ATPAF2Q8N5M1 289 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 TSTD1Q8NFU3 115 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 OR11H7Q8NGC8 314 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 PDCD6IPQ8WUM4 868 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 TSEN15Q8WW01 171 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 C1orf54Q8WWF1 131 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 KLK6Q92876 244 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 RPEQ96AT9 228 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CAPZA3Q96KX2 299 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 C18orf15Q96N68 181 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CSPG4P5Q96PW8 444 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ALS2CR12Q96Q35 445 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CAMK2N2Q96S95 79 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ZNF382Q96SR6 550 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 SPIN2AQ99865 258 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 SPIN2BQ9BPZ2 258 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 TSGA10Q9BZW7 698 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 EXO5Q9H790 373 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 AUNIPQ9H7T9 357 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CCNB1IP1Q9NPC3 277 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 C8orf17Q9NRJ1 99 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 C20orf96Q9NUD7 363 aaPredicted RBP2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CLN6Q9NWW5 311 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 STOML2Q9UJZ1 356 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 ATMQ13315 3056 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 KNTC1P50748 2209 aa2.48□□□□□ -2.01
CTNNA1-222ENST00000520400 CSPG4Q6UVK1 2322 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 ICE1Q9Y2F5 2266 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 hCG_1818297A0A087WSY0 165 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 TRAV25A0A0B4J276 109 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KCNK1O00180 336 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KPNA3O00505 521 aaPredicted RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 BCKDKO14874 412 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 SIVA1O15304 175 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KDELR3O43731 214 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 HBE1P02100 147 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 HLA-DQB2P05538 268 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 DEKP35659 375 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 OPRK1P41145 380 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RWDD2BP57060 319 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RPL23P62829 140 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 MRPS25P82663 173 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms