RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ALDH3B1P43353 468 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 VEGFCP49767 419 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 MEOX2P50222 304 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 RAB13P51153 203 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF121P58317 390 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SRSF4Q08170 494 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM74A3Q4VXF1 159 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SPATA46Q5T0L3 261 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 HIST2H2BCQ6DN03 193 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 DHRS7BQ6IAN0 325 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 LIN54Q6MZP7 749 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ALKAL2Q6UX46 152 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 LRRN1Q6UXK5 716 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SLC36A1Q7Z2H8 476 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF573Q86YE8 665 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 Q8IYB0 196 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF101Q8IZC7 436 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 CMTM4Q8IZR5 234 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 PNLDC1Q8NA58 520 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 BBS1Q8NFJ9 593 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 DMBX1Q8NFW5 382 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 OR1M1Q8NGA1 313 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 OR5D14Q8NGL3 314 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF671Q8TAW3 534 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 RAB40AQ8WXH6 277 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SPSB4Q96A44 273 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 PHYHIPLQ96FC7 376 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 C18orf12Q96KH6 178 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 Q96MF0 132 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF75AQ96N20 296 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 S100A13Q99584 98 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 C12orf57Q99622 126 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SEC22CQ9BRL7 303 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 CHIAQ9BZP6 476 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 NKX6-2Q9C056 277 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 PBOV1Q9GZY1 135 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SLITRK2Q9H156 845 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 RHOFQ9HBH0 211 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 LPAR3Q9UBY5 353 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 OPN4Q9UHM6 478 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 HHLA2Q9UM44 414 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 STARD10Q9Y365 291 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 ABCA12Q86UK0 2595 aa4.81□□□□□ -1.64
CTNNA1-220ENST00000520260 FREM1Q5H8C1 2179 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CREBBPQ92793 2442 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 TRAV38-1A0A0B4J264 116 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 RFPL4AA6NLU0 287 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 E9PI62 339 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 F5H5P2 479 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 RFPL4AL1F8VTS6 287 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 J3QLW9 94 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 NUPL2O15504 423 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 RPP14O95059 124 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FSTL3O95633 263 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CST4P01036 141 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 MELTFP08582 738 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 DBHP09172 617 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CALCBP10092 127 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF19P17023 458 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FAUP35544 74 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 MDH2P40926 338 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CD200P41217 278 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 NPY4RP50391 375 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CAPZA1P52907 286 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 SCAND1P57086 179 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 GNG3P63215 75 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CCL8P80075 99 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF85Q03923 595 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 PSG7Q13046 419 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CDK5R1Q15078 307 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM189A2Q15884 450 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 KRTAP27-1Q3LI81 207 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 C10orf91Q5T1B1 145 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM27D1Q5T7N8 215 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 SFRP4Q6FHJ7 346 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 RPL22L1Q6P5R6 122 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 C22orf34Q6ZV56 151 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 BHLHE23Q8NDY6 225 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2AK2Q8NG84 335 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR4D10Q8NGI6 311 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR5A2Q8NGI9 324 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR52I2Q8NH67 350 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR5AK2Q8NH90 309 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FGFBP3Q8TAT2 258 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 LGALS14Q8TCE9 139 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 RPS4Y2Q8TD47 263 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 GPR148Q8TDV2 347 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 TSEN15Q8WW01 171 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FCAMRQ8WWV6 532 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ST8SIA2Q92186 375 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 CCL17Q92583 94 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 NEUROG1Q92886 237 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 SPSB1Q96BD6 273 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2V2Q96R30 315 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 TBX5Q99593 518 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 GAL3ST1Q99999 423 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ARL6Q9H0F7 186 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ALX4Q9H161 411 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms