RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ICAM4Q14773 271 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 SLC35F1Q5T1Q4 408 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 HAGHLQ6PII5 290 aaPredicted RBP4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 IZUMO1Q8IYV9 350 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 OR8H2Q8N162 312 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 C4orf33Q8N1A6 199 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 TRIML2Q8N7C3 387 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 REEP6Q96HR9 211 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 RITA1Q96K30 269 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 PPP1R36Q96LQ0 422 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 SPACA5Q96QH8 159 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 RASL11BQ9BPW5 248 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 CHRDL1Q9BU40 450 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 CHST6Q9GZX3 395 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 CACYBPQ9HB71 228 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 HES4Q9HCC6 221 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 PARP11Q9NR21 331 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 MRPL22Q9NWU5 206 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 RASL12Q9NYN1 266 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 ZNF180Q9UJW8 692 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 PIGLQ9Y2B2 252 aa4.85□□□□□ -1.63
CTNNA1-216ENST00000519489 NACAE9PAV3 2078 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 A0A1W2PN81 502 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 B2RBV5 119 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 TOR1AO14656 332 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 CHRNA7P36544 502 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 GLIPR1P48060 266 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 ACTBP60709 375 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 ERVK11-1P61568 191 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 DEFA5Q01523 94 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 C17orf58Q2M2W7 97 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 SMIM21Q3B7S5 101 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 TM4SF20Q53R12 229 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 ZNF660Q6AZW8 331 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 DRAM2Q6UX65 266 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 GDPD3Q7L5L3 318 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 OR13C2Q8NGS9 318 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 OR52E6Q96RD3 313 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 RARRES2Q99969 163 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 PARP12Q9H0J9 701 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 SLC25A19Q9HC21 320 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 FAM212BQ9NTI7 297 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 CHCHD3Q9NX63 227 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 IL36RNQ9UBH0 155 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 SNX12Q9UMY4 172 aa4.84□□□□□ -1.63
CTNNA1-216ENST00000519489 A0A1W2PPE3 182 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ANXA2P2A6NMY6 339 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 J3QR06 171 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 UBE2CO00762 179 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 RFXANKO14593 260 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ARPC1BO15143 372 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 XRCC2O43543 280 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 CST4P01036 141 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 OXTP01178 125 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ZCCHC18P0CG32 403 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 RPL35AP18077 110 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ZP3P21754 424 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ALDH3A1P30838 453 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 APOC4P55056 127 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 KRTAP10-4P60372 401 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 NAA20P61599 178 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 CALCOCO2Q13137 446 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 EIF2B1Q14232 305 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 PCLAFQ15004 111 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ECSCRQ19T08 205 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 LRRC36Q1X8D7 754 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 MSRB3Q8IXL7 192 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 OR8H3Q8N146 312 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 OR2T10Q8NGZ9 312 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 TMEM239Q8WW34 195 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNRF4Q8WWF5 429 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 PIGCQ92535 297 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 CREB3L1Q96BA8 519 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 NAPGQ99747 312 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 RANGRFQ9HD47 186 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 PCDHB16Q9NRJ7 776 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 MRM2Q9UI43 246 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 B9D1Q9UPM9 204 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC7A11Q9UPY5 501 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 SIGLEC7Q9Y286 467 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 PPP2R2CQ9Y2T4 447 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 MPC1Q9Y5U8 109 aa4.83□□□□□ -1.64
CTNNA1-216ENST00000519489 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 NBDYA0A0U1RRE5 68 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 CDC42EP2O14613 210 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 TGOLN2O43493 480 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 AHCYL1O43865 530 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 NOS1APO75052 506 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 CD14P08571 375 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 VHLP40337 213 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms