RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TMCO1Q9UM00 188 aa2.3□□□□□ -2.04
CPNE3-204ENST00000517862 IGKV1D-8A0A087WSZ0 117 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 IGLV1-36A0A0B4J1U3 117 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KIR2DL5BA0A0G2JN68 375 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KIR2DL5BA0A0G2JPC4 375 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 A0A1B0GWB2 263 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR5B21A6NL26 309 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 DCTN6O00399 190 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 TNFSF11O14788 317 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ENSAO43768 121 aaKnown RBP2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR2F2O95006 317 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 LGI1O95970 557 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 CSTAP01040 98 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 TPM1P09493 284 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR8U8P0C7N1 319 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 CECR9P0C854 216 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF250P15622 560 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 RPA3P35244 121 aaPredicted RBP2.29□□□□□ -2.04
CPNE3-204ENST00000517862 SLC1A2P43004 574 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 RAB9AP51151 201 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 STX4Q12846 297 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 DEFB136Q30KP8 78 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KRT71Q3SY84 523 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 AADACL4Q5VUY2 407 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 PLCXD3Q63HM9 321 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 HBMQ6B0K9 141 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NIPAL1Q6NVV3 410 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 LINC00322Q6ZN03 302 aaPredicted RBP2.29□□□□□ -2.04
CPNE3-204ENST00000517862 GRINAQ7Z429 371 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 LRP11Q86VZ4 500 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 VRK2Q86Y07 508 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF695Q8IW36 515 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NRMQ8IXM6 262 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KIR2DL5AQ8N109 375 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 MS4A15Q8N5U1 240 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NPWQ8N729 165 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 PQLC3Q8N755 202 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 BEST4Q8NFU0 473 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR4K17Q8NGC6 315 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR13F1Q8NGS4 319 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KIR2DL5BQ8NHK3 375 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 VN1R17PQ8TDU5 208 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 GPX8Q8TED1 209 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 POM121L2Q96KW2 1035 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 MS4A4EQ96PG1 132 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KCNA7Q96RP8 456 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OPRPNQ99935 248 aaPredicted RBP2.29□□□□□ -2.04
CPNE3-204ENST00000517862 SIKE1Q9BRV8 207 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NAT9Q9BTE0 207 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ANKRD60Q9BZ19 345 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NMUR2Q9GZQ4 415 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 AICDAQ9GZX7 198 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ELOVL6Q9H5J4 265 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 LYRM4Q9HD34 91 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 CHRAC1Q9NRG0 131 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 NUDT15Q9NV35 164 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 IMPAD1Q9NX62 359 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 ADA2Q9NZK5 511 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 OR1A1Q9P1Q5 309 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 PLLPQ9Y342 182 aa2.29□□□□□ -2.04
CPNE3-204ENST00000517862 KCNE1BA0A087WTH5 132 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 A0A1B0GU03 582 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 A0A1W2PRF3 423 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 A0A1W2PRM7 423 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 NPFFO15130 113 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 SIVA1O15304 175 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 AIFM1O95831 613 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 S100A9P06702 114 aaKnown RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 SLC35G6P0C7Q6 338 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 CPN2P22792 545 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 MT3P25713 68 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 NUP62P37198 522 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 DDOSTP39656 456 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 CRISP1P54107 249 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RPS15AP62244 130 aaKnown RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RAB11AP62491 216 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 BLCAPP62952 87 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 XIAPP98170 497 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 PAX5Q02548 391 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RAB11BQ15907 218 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 LRRC75BQ2VPJ9 315 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR52W1Q6IF63 320 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF774Q6NX45 483 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 TTC23LQ6PF05 361 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 GPRIN3Q6ZVF9 776 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 SLC16A14Q7RTX9 510 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF329Q86UD4 541 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 SLC25A42Q86VD7 318 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 LRRC28Q86X40 367 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 UBE2DNLQ8IWF7 75 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR1S2Q8NGQ3 325 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR8U1Q8NH10 309 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR2V1Q8NHB1 315 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RHEBL1Q8TAI7 183 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 MARCH1Q8TCQ1 289 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms