RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 RAI1Q7Z5J4 1906 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TRAV19A0A0A6YYK7 116 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 IGHV3-74A0A0B4J1X5 117 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 LOC389332A0A1B0GUA5 103 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GOLGA6L4A6NEF3 574 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FAM183AA6NL82 134 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZFP92A6NM28 416 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TRIM49D1C9J1S8 452 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 KRBOX1C9JBD0 128 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 K7EQS6 105 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 EDIL3O43854 480 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GCM2O75603 506 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CNMDO75829 334 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CA2P00918 260 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 IGLV2-8P01709 118 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 HLA-DPB1P04440 258 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 P0C879 139 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 IL3RAP26951 378 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 HTR1EP28566 365 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CXCL5P42830 114 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SLCO1A2P46721 670 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CDK9P50750 372 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CRIP2P52943 208 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CRISP3P54108 245 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SLC18A1P54219 525 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TMEM33P57088 247 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PSME3P61289 254 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CDK5Q00535 292 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MEF2CQ06413 473 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PNOCQ13519 176 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 C1DQ13901 141 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CLEC12BQ2HXU8 276 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MESTQ5EB52 335 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ATAD3CQ5T2N8 411 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZC2HC1BQ5TFG8 222 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TMEM215Q68D42 235 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SFXN4Q6P4A7 337 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TNFAIP8L2Q6P589 184 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FAM131AQ6UXB0 335 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GSG1LQ6UXU4 331 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 H2AFVQ71UI9 128 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FAM19A3Q7Z5A8 133 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 LYG2Q86SG7 212 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 NAA40Q86UY6 237 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MDP1Q86V88 176 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 NIT1Q86X76 327 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 KRTAP19-1Q8IUB9 90 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TMEM86BQ8N661 226 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF525Q8N782 197 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 WDSUB1Q8N9V3 476 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SLC26A10Q8NG04 563 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 OR2M7Q8NG81 312 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 OR11L1Q8NGX0 322 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 OR10G6Q8NH81 332 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNRF2Q8NHG8 242 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 RHOXF1Q8NHV9 184 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TYMSOSQ8TAI1 123 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FAM172AQ8WUF8 416 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 IMP4Q96G21 291 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PHB2Q99623 299 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 HSD17B10Q99714 261 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PRSS27Q9BQR3 290 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MED18Q9BUE0 208 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TMEM109Q9BVC6 243 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GGTLC1Q9BX51 225 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MRPL20Q9BYC9 149 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TXNIPQ9H3M7 391 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CDC42EP4Q9H3Q1 356 aaKnown RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GOLGA2P5Q9HBQ8 144 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 C8orf4Q9NR00 106 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GLTPQ9NZD2 209 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 VPS29Q9UBQ0 182 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 DKKL1Q9UK85 242 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FBXO5Q9UKT4 447 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 V9GYQ6 96 aa1.93□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CLUHO75153 1309 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CCDC144AA2RUR9 1427 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 NOTCH4Q99466 2003 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PCNX3Q9H6A9 2034 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TRAV8-3A0A0A6YYJ7 113 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 IGKV6-21A0A0C4DH24 114 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 KLF18A0A0U1RQI7 1052 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 C5orf63A6NC05 138 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PGPA6NDG6 321 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 KRTAP29-1A8MX34 341 aaPredicted RBP1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 UPK1AO00322 258 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CHP2O43745 196 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ANGPTL7O43827 346 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MT-ND4P03905 459 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MRPL3P09001 348 aaKnown RBP1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZDHHC11BP0C7U3 371 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 LINC00614P0C842 121 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ESDP10768 282 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 UCHL3P15374 230 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CRISP2P16562 243 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GABRR1P24046 479 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 MIPP30301 263 aa1.92□□□□□ -2.1
SCARNA11.3-201ENST00000517276 CD79BP40259 229 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms