RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PRSS50Q9UI38 385 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 KIF25Q9UIL4 384 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF346Q9UL40 294 aaKnown RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TIMM10BQ9Y5J6 103 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TRAV27A0A087WT01 109 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 TEX13CA0A0J9YWL9 993 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A1B0GVI7 797 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 FAM240BA0A1B0GVZ2 78 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A1W2PPL8 197 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 TCRBV4S1A1TA0A5B7 111 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PLSCR5A0PG75 271 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 BTBD17A6NE02 478 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RIIAD1A6NNX1 92 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 A8MZ25 164 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 C11orf98E9PRG8 122 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 LGALS9O00182 355 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 GABRPO00591 440 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PRODHO43272 600 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SELENOFO60613 162 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC16A7O60669 478 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 KHDRBS3O75525 346 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 B3GALNT1O75752 331 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RAD51DO75771 328 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SOX14O95416 240 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RENP00797 406 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHV3-9P01782 118 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 IGHA1P01876 353 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CRYAAP02489 173 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 APOC1P02654 83 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 EIF4EP06730 217 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 FGF2P09038 288 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 MMP7P09237 267 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 H2AFB1P0C5Y9 115 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 H2AFB2P0C5Z0 115 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC2A2P11168 524 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ANXA3P12429 323 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF35P13682 527 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF14P17017 642 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PRKACAP17612 351 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ATF4P18848 351 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CXCL2P19875 107 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 MSR1P21757 451 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PAICSP22234 425 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 EDNRAP25101 427 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PSMA1P25786 263 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 STOMP27105 288 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 LAP3P28838 519 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 NOS3P29474 1203 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CALCRP30988 508 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CDKN2AP42771 156 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RAD52P43351 418 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 GPR4P46093 362 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 WNT4P56705 351 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RPS23P62266 143 aaKnown RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB1AP62820 205 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ERVK-25P63136 954 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 HIST1H3AP68431 136 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CDK5Q00535 292 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 HSF2Q03933 536 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PLP2Q04941 152 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ACSM1Q08AH1 577 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SCRN3Q0VDG4 424 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 KLF9Q13886 244 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 GRK1Q15835 563 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SRSF7Q16629 238 aaKnown RBP eCLIP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PCK2Q16822 640 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 GSG1Q2KHT4 349 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 HSD17B12Q53GQ0 312 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 MESTQ5EB52 335 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 NHLRC3Q5JS37 347 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC35D3Q5M8T2 416 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 BCL2L15Q5TBC7 163 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 HIST2H3PS2Q5TEC6 136 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2G6Q5TZ20 316 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 TRIQKQ629K1 86 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 RGS7BPQ6MZT1 257 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 DEGS2Q6QHC5 323 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 VHLLQ6RSH7 139 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ATRAIDQ6UW56 229 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF813Q6ZN06 617 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 CFAP77Q6ZQR2 320 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 HIST2H3AQ71DI3 136 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 BTN2A1Q7KYR7 527 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 LINGO2Q7L985 606 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 NLRC3Q7RTR2 1065 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC16A14Q7RTX9 510 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 Q8N2B8 174 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 Q8N402 240 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 MS4A15Q8N5U1 240 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 TCEANCQ8N8B7 351 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ZFP41Q8N8Y5 198 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 UXS1Q8NBZ7 420 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 GJC3Q8NFK1 279 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 OR13C2Q8NGS9 318 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 TEX47Q8TBZ9 253 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 FANK1Q8TC84 345 aa2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF431Q8TF32 576 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 PHLDA1Q8WV24 401 aaPredicted RBP2.5□□□□□ -2.01
SCARNA13-201ENST00000516672 UFD1Q92890 307 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms