RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 MPV17LQ2QL34 196 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 FAM76BQ5HYJ3 339 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 WDR86Q86TI4 376 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 MITD1Q8WV92 249 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 IGHV2OR16-5A0A0B4J2B6 119 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 M0R233 179 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 TUBG1P23258 451 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 TMEM185AQ8NFB2 350 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 RTBDNQ9BSG5 229 aaPredicted RBP13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 TUBG2Q9NRH3 451 aa13.17□□□□□ -0.3
THUMPD3-210ENST00000515662 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 RHBDL1O75783 438 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 PRKACAP17612 351 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 VAMP1P23763 118 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 CALCRP30988 508 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 BAMBIQ13145 260 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 Q6ZPA2 131 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 ASB13Q8WXK3 278 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TMEM230Q96A57 120 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 S100PBPQ96BU1 408 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 ELMOD3Q96FG2 381 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 UBQLN2Q9UHD9 624 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 AUP1Q9Y679 476 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 DSPP15924 2871 aaKnown RBP13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TEX46H3BTG2 121 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 DUSP1P28562 367 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 DHODHQ02127 395 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 IKZF1Q13422 519 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 TIMM23BQ5SRD1 257 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 ZNF2Q9BSG1 426 aaPredicted RBP13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 BCL2L14Q9BZR8 327 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 NECAP2Q9NVZ3 263 aa13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
THUMPD3-210ENST00000515662 ACACAQ13085 2346 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 ATMQ13315 3056 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 PRRG2O14669 202 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 PI3P19957 117 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 OR8G1Q15617 311 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 SCCPDHQ8NBX0 429 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 OR5M8Q8NGP6 311 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 PHB2Q99623 299 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 IFNA7P01567 189 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 FAM87AP0C7U9 286 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 PPP3CBP16298 524 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 OR8G5Q8NG78 346 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 LIME1Q9H400 295 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
THUMPD3-210ENST00000515662 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 POM121CA8CG34 1229 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 H0YL77 283 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 SHOXO15266 292 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 HLA-GP17693 338 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 KITLGP21583 273 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 GLRA1P23415 457 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 ECI1P42126 302 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 OPCMLQ14982 345 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 AANATQ16613 207 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 CLLU1Q5K131 121 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 LPCAT3Q6P1A2 487 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 DHRS11Q6UWP2 260 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 DHRS9Q9BPW9 319 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 TMPRSS13Q9BYE2 586 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 TMEM100Q9NV29 134 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 TINAGQ9UJW2 476 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 ZNF83P51522 516 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 NAAAQ02083 359 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 ZNF154Q13106 437 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 ZNF718Q3SXZ3 478 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 GFRALQ6UXV0 394 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 SPACA1Q9HBV2 294 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 CHMP1AQ9HD42 196 aaPredicted RBP13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
THUMPD3-210ENST00000515662 FZR1Q9UM11 496 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms