RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LOXP28300 417 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 TGFBR1P36897 503 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 GDI2P50395 445 aaKnown RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 MEF2BQ02080 365 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 SELENBP1Q13228 472 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 EIF3IQ13347 325 aaKnown RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 ZNF266Q14584 549 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 RBMY1FQ15415 496 aaKnown RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 MRPL23Q16540 153 aaKnown RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 C9orf64Q5T6V5 341 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 GTPBP8Q8N3Z3 284 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 OR5T1Q8NG75 326 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 OR4C5Q8NGB2 326 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 OR5K2Q8NHB8 316 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 LYPD6BQ8NI32 183 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 KLF14Q8TD94 323 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 NRBF2Q96F24 287 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 IP6K3Q96PC2 410 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 KLF6Q99612 283 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 C20orf24Q9BUV8 137 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 C1orf50Q9BV19 199 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 BBS2Q9BXC9 721 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 PDP1Q9P0J1 537 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-211ENST00000515597 DUX4Q9UBX2 424 aa1.73□□□□□ -2.13
LINC01088-211ENST00000515597 USF3Q68DE3 2245 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 IGKV1-8A0A0C4DH67 115 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 A0A1B0GUH1 482 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 ARGFXA6NJG6 315 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 TNFRSF11BO00300 401 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 PLPP1O14494 284 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 TAAR5O14804 337 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 SLC31A1O15431 190 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 AQP9O43315 295 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 SLC37A4O43826 429 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 HUS1O60921 280 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CTAG2O75638 210 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CD82P27701 267 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 HTR1DP28221 377 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CD70P32970 193 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 SPAM1P38567 509 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 MRPL19P49406 292 aaKnown RBP1.72□□□□□ -2.13
LINC01088-211ENST00000515597 PSMC5P62195 406 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CYP24A1Q07973 514 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 IL15RAQ13261 267 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 DGCR6Q14129 220 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 ZNF235Q14590 738 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 NCF4Q15080 339 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CHRNA6Q15825 494 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 ARMC12Q5T9G4 340 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 C12orf54Q6X4T0 127 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 Q6ZS92 163 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 Q6ZSR6 202 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 ZNF680Q8NEM1 530 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 C1orf64Q8NEQ6 169 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 OR5M1Q8NGP8 315 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CCL4L1Q8NHW4 92 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 SPPL2BQ8TCT7 592 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 LMX1AQ8TE12 382 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 HAUS1Q96CS2 278 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 BTN2A3PQ96KV6 586 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 UCK2Q9BZX2 261 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 ZSCAN16Q9H4T2 348 aaPredicted RBP1.72□□□□□ -2.13
LINC01088-211ENST00000515597 IL37Q9NZH6 218 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 DHCR7Q9UBM7 475 aaKnown RBP1.72□□□□□ -2.13
LINC01088-211ENST00000515597 SLC17A4Q9Y2C5 497 aa1.72□□□□□ -2.13
LINC01088-211ENST00000515597 CNTRLQ7Z7A1 2325 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 SPTY2D1-AS1A0A0U1RR47 76 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 LRRIQ4A6NIV6 560 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 MANBAO00462 879 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 SLC9A3R1O14745 358 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 GATBO75879 557 aaKnown RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 LSM8O95777 96 aaKnown RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 HPRT1P00492 218 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 KRT14P02533 472 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CXCL8P10145 99 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 OR1E1P30953 314 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CA7P43166 264 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 UBE2E1P51965 193 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 RGS8P57771 180 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF121P58317 390 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 TAS2R46P59540 309 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 RPS11P62280 158 aaKnown RBP eCLIP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 BAMBIQ13145 260 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 PNOCQ13519 176 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CST6Q15828 149 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 TAF9Q16594 264 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 DEFB113Q30KQ7 82 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 PIP5KL1Q5T9C9 394 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CARD17Q5XLA6 110 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CENPQQ7L2Z9 268 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 MDP1Q86V88 176 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF101Q8IZC7 436 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 DAW1Q8N136 415 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 STK40Q8N2I9 435 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 PDCL2Q8N4E4 241 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 SLC35G3Q8N808 338 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 TTC29Q8NA56 475 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-211ENST00000515597 UBAC2Q8NBM4 344 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 OR4M1Q8NGD0 313 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms