RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	FAM106CP	P0CH98	169 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	PRKACG	P22612	351 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	OR3A1	P47881	315 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	OR3A4P	P47883	348 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	NPBWR2	P48146	333 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	PRRX1	P54821	245 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	CDC42	P60953	191 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	KPNB1	Q14974	876 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF146	Q15072	292 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	ODF4	Q2M2E3	257 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	KLHL22	Q53GT1	634 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	SPIN3	Q5JUX0	258 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	C18orf65	Q6ZTR6	163 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	SLC35F2	Q8IXU6	374 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	HS3ST5	Q8IZT8	346 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	TAS2R3	Q9NYW6	316 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	MRM2	Q9UI43	246 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	TRBV2	A0A0J9YWF9	115 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459		B2RBV5	119 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	LY6L	H3BQJ8	138 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459		H3BSH0	61 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	SIRPB1	O00241	398 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	DCTN3	O75935	186 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	RPP14	O95059	124 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	PRKACA	P17612	351 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	BCL3	P20749	454 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	GP2	P55259	537 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	SNU13	P55769	128 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	MEPCE	Q7L2J0	689 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	KLHL30-AS1	Q8NEE0	82 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	CORO2A	Q92828	525 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	ADGRL4	Q9HBW9	690 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	CLN6	Q9NWW5	311 aa		12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	LSM4	Q9Y4Z0	139 aa	Known RBP	12.46	□□□□□ -0.41
LMNA-223	ENST00000515459	SERPINE3	A8MV23	424 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ENTPD6	O75354	484 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	GDNF	P39905	211 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	RBP2	P50120	134 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	CRISP1	P54107	249 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ATP1B3	P54709	279 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	RBM39	Q14498	530 aa	Known RBP	12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	NKAPL	Q5M9Q1	402 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	CATSPERD	Q86XM0	798 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	THNSL2	Q86YJ6	484 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ZNF695	Q8IW36	515 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ADGRG5	Q8IZF4	528 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	COMMD1	Q8N668	190 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	YIPF7	Q8N8F6	280 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	CCDC54	Q8NEL0	328 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	OR4D6	Q8NGJ1	314 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ASB9	Q96DX5	294 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	NOL4L	Q96MY1	436 aa	Predicted RBP	12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ADI1	Q9BV57	179 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	EXOSC4	Q9NPD3	245 aa	Known RBP	12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.45	□□□□□ -0.42
LMNA-223	ENST00000515459	ARL2BP	Q9Y2Y0	163 aa		12.45	□□□□□ -0.42
LMNA-223	ENST00000515459		A0A087X0M5	115 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459		A0A1B0GX30	115 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A18P	A6NE21	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A16P	A6NEW6	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A20P	A6NIJ5	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A9P	A6NNJ1	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A12P	A8MX19	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A5P	A8MXJ8	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	SH2D1B	O14796	132 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	PRKY	O43930	277 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	OR2H2	O95918	312 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	KRT8	P05787	483 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A15P	P0C7V4	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A13P	P0C7W8	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A14P	P0C7W9	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	FAM90A24P	P0C7X0	464 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	CALCB	P10092	127 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	PTGFR	P43088	359 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	GLIPR1	P48060	266 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	POU3F4	P49335	361 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	SLC35B1	P78383	322 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	AES	Q08117	197 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	DNAAF1	Q8NEP3	725 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	CANT1	Q8WVQ1	401 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	C10orf35	Q96D05	121 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	PRRG3	Q9BZD7	231 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	PCDHB16	Q9NRJ7	776 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	GSTK1	Q9Y2Q3	226 aa		12.44	□□□□□ -0.42
LMNA-223	ENST00000515459	ODAM	A1E959	279 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	SNRNP70	P08621	437 aa	Known RBP	12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	HOXB6	P17509	224 aa	Known RBP	12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	MTCP1	P56278	107 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	RAB25	P57735	213 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	PTGES3	Q15185	160 aa	Known RBP	12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	NXNL2	Q5VZ03	156 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	C5orf56	Q8N8D9	126 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	OR9G1	Q8NH87	305 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	DNAJC9	Q8WXX5	260 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	PP6455	Q8WZ26	134 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	TOMM40L	Q969M1	308 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	RPE	Q96AT9	228 aa		12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	CCDC124	Q96CT7	223 aa	Known RBP	12.43	□□□□□ -0.42
LMNA-223	ENST00000515459	DUX3	Q96PT4	197 aa		12.43	□□□□□ -0.42

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