RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 F5H697 171 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
TRIO-222ENST00000515144 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 SOHLH1Q5JUK2 328 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 TMUB2Q71RG4 321 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 OR4E1P0C645 316 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 GVQW1Q8N7I0 195 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 PTP4A1Q93096 173 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 TIAL1Q01085 375 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRIO-222ENST00000515144 CCDC190Q86UF4 302 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
TRIO-222ENST00000515144 SPSB1Q96BD6 273 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 ACTR3CQ9C0K3 210 aaPredicted RBP12.68□□□□□ -0.38
TRIO-222ENST00000515144 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 B4E171 279 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 GP1BAP07359 652 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 TSPAN7P41732 249 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 FBXW9Q5XUX1 488 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 RNF141Q8WVD5 230 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 C19orf43Q9BQ61 176 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 FOXJ3Q9UPW0 622 aa12.68□□□□□ -0.38
TRIO-222ENST00000515144 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
TRIO-222ENST00000515144 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 OR4D11Q8NGI4 311 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 HMGCLL1Q8TB92 370 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 TCRBV16S1A1N1A0A5B0 115 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 FCER1GP30273 86 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 LPAR6P43657 344 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 DDA1Q9BW61 102 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 GABARAPL1Q9H0R8 117 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 SNAPINO95295 136 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
TRIO-222ENST00000515144 UCK1Q9HA47 277 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 TFPI2P48307 235 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 MS4A18H0YCH9 400 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 ZFPL1O95159 310 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 DUS4LO95620 317 aaKnown RBP12.67□□□□□ -0.38
TRIO-222ENST00000515144 PNPP00491 289 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 GPR6P46095 362 aaPredicted RBP12.67□□□□□ -0.38
TRIO-222ENST00000515144 MS4A18Q3C1V0 323 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 PDZD11Q5EBL8 140 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 OR13D1Q8NGV5 346 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
TRIO-222ENST00000515144 TMEFF2Q9UIK5 374 aaPredicted RBP12.67□□□□□ -0.38
TRIO-222ENST00000515144 C21orf58P58505 322 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 PXDC1Q5TGL8 231 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 S100A11P31949 105 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 TSPO2Q5TGU0 170 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 FAM103A1Q9BTL3 118 aaKnown RBP12.66□□□□□ -0.38
TRIO-222ENST00000515144 MMP7P09237 267 aaPredicted RBP12.66□□□□□ -0.38
TRIO-222ENST00000515144 COL10A1Q03692 680 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 MESTQ5EB52 335 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 H3F3CQ6NXT2 135 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 CLEC9AQ6UXN8 241 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 ZNF488Q96MN9 340 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 OR2V2Q96R30 315 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 PIMREGQ9BSJ6 248 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
TRIO-222ENST00000515144 TFAP2AP05549 437 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 SULT1A3P0DMM9 295 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 SULT1A4P0DMN0 295 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 OR5R1Q8NH85 324 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 TCAPO15273 167 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 UPK3AO75631 287 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 NTF3P20783 257 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 FNDC7Q5VTL7 733 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 LYSMD2Q8IV50 215 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 RNF7Q9UBF6 113 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 AUP1Q9Y679 476 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 OIP5O43482 229 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 SLC25A1P53007 311 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 CDCA4Q9BXL8 241 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 PRELID1Q9Y255 219 aa12.66□□□□□ -0.38
TRIO-222ENST00000515144 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 A0A1W2PQM1 296 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 IGKV1D-16P01601 117 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 TOR2AQ5JU69 321 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 PARP11Q9NR21 331 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
TRIO-222ENST00000515144 IGKV1-8A0A0C4DH67 115 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 METTL15P1P0C7V9 234 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 CSRP2Q16527 193 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 OR2H1Q9GZK4 316 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 SPINK4O60575 86 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 CYB5R3P00387 301 aaPredicted RBP12.65□□□□□ -0.38
TRIO-222ENST00000515144 RELAQ04206 551 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 KLRB1Q12918 225 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms