RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MED30Q96HR3 178 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 GAL3ST1Q99999 423 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 SELENOIQ9C0D9 397 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 BPESC1Q9GZL8 116 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 FAM234AQ9H0X4 552 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF665Q9H7R5 613 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 RHBDL2Q9NX52 303 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 MIOXQ9UGB7 285 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 HSF4Q9ULV5 492 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 ZFHX3Q15911 3703 aa10□□□□□ -0.81
PDLIM5-220ENST00000514830 METTL21EPA6NDL7 271 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 RFPL4AA6NLU0 287 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 RFPL4AL1F8VTS6 287 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 GEMIN2O14893 280 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 SIGLEC5O15389 551 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF737O75373 536 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 HAND1O96004 215 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 CSN2P05814 226 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 KCNJ3P48549 501 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 EFNB2P52799 333 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 HOXA4Q00056 320 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 CNPY1Q3B7I2 92 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 PIGYQ3MUY2 71 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 SFRP4Q6FHJ7 346 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 SIGIRRQ6IA17 410 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 SLC36A1Q7Z2H8 476 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 CD177Q8N6Q3 437 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 BOLLQ8N9W6 283 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 FAM46BQ96A09 425 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 GAFA1Q96PS6 74 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 DCUN1D5Q9BTE7 237 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 KCNK15Q9H427 330 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 BANF2Q9H503 90 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■■■ 27
PDLIM5-220ENST00000514830 IL36RNQ9UBH0 155 aa9.99□□□□□ -0.81
PDLIM5-220ENST00000514830 IGHV3OR15-7A0A075B7D8 119 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 IGHV4-30-2A0A087WSY4 118 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 A0A096LNT2 108 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 A0A0A6YYD4 124 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 NKX6-3A6NJ46 265 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 CEACAM18A8MTB9 384 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 K7N7A8 449 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 RAB27BO00194 218 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 GPR37O15354 613 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 OR2H2O95918 312 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 GYPAP02724 150 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 WNT2P09544 360 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 FUT3P21217 361 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 RBMXP38159 391 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 NPY4RP50391 375 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 IL13RA1P78552 427 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 PLA2G7Q13093 441 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 ARL6IP1Q15041 203 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 CARTPTQ16568 116 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 TAF9Q16594 264 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 AVPI1Q5T686 147 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 BIVMQ86UB2 503 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 SAMD12Q8N8I0 201 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 MCFD2Q8NI22 146 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 C1orf159Q96HA4 380 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 WDFY2Q96P53 400 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 PTTG2Q9NZH5 202 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 COMMD3Q9UBI1 195 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 MAB21L2Q9Y586 359 aa9.98□□□□□ -0.81
PDLIM5-220ENST00000514830 CR1P17927 2039 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 TRAV24A0A0B4J272 114 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 POM121CA8CG34 1229 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 A8MXK9 166 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 DEGS1O15121 323 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 PDCD6O75340 191 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 CA11O75493 328 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 OR7C1O76099 320 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF205O95201 554 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 IGHV2-5P01817 119 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 CHATP28329 748 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 MNDAP41218 407 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 PITPNBP48739 271 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 TMEM50BP56557 158 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 GMFBP60983 142 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 LMO4P61968 165 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 COL10A1Q03692 680 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 LOXL1Q08397 574 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 IKZF1Q13422 519 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 ZNF841Q6ZN19 808 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 C17orf107Q6ZR85 190 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 NLRC3Q7RTR2 1065 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 CMTM4Q8IZR5 234 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 BATF2Q8N1L9 274 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 GAPTQ8N292 157 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 C19orf18Q8NEA5 215 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 DEFB108BQ8NET1 73 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 OR5D13Q8NGL4 314 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 OR10R2Q8NGX6 335 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 PPP1R35Q8TAP8 253 aa9.97□□□□□ -0.81
PDLIM5-220ENST00000514830 RAB39BQ96DA2 213 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms