RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SAXO1Q8IYX7 474 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 TMEM104Q8NE00 496 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 H1FXQ92522 213 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 C1orf159Q96HA4 380 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 S100A13Q99584 98 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 FUNDC2Q9BWH2 189 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 METTL9Q9H1A3 318 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 PLGRKTQ9HBL7 147 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 HIF1ANQ9NWT6 349 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 ING3Q9NXR8 418 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 RASL12Q9NYN1 266 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC25A10Q9UBX3 287 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 CSPG4Q6UVK1 2322 aa8.13□□□□□ -1.11
TOPBP1-209ENST00000513818 SVEP1Q4LDE5 3571 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A0G2JK05 382 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 A8MXK9 166 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC22A1O15245 554 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 NDUFB3O43676 98 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 FOXH1O75593 365 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 CRTAPO75718 401 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 MPIG6BO95866 241 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 OR2H2O95918 312 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 CSTBP04080 98 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 ACAA1P09110 424 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC2A2P11168 524 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 FOSL1P15407 271 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 RAB3BP20337 219 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 GABRR1P24046 479 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 HTR2CP28335 458 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 FGF9P31371 208 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SDC2P34741 201 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 MTNR1BP49286 362 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 PRB3Q04118 309 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 EDDM3AQ14507 147 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 RAB11BQ15907 218 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 C1orf100Q5SVJ3 147 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 GPR107Q5VW38 600 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 FAM166AQ6J272 317 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 FIP1L1Q6UN15 594 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 ASCL4Q6XD76 172 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC16A12Q6ZSM3 486 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 BTN2A1Q7KYR7 527 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 GLCCI1Q86VQ1 547 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 OSR2Q8N2R0 312 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC25A28Q96A46 364 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 TMEM186Q96B77 213 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 SDSLQ96GA7 329 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 KCTD7Q96MP8 289 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 UQCC2Q9BRT2 126 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 PPA2Q9H2U2 334 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 KAAG1Q9UBP8 84 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 KCNS2Q9ULS6 477 aa8.12□□□□□ -1.11
TOPBP1-209ENST00000513818 LOC105371242A0A075B767 164 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 INAFM1C9JVW0 142 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC17A2O00624 439 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 GEMIN2O14893 280 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 NDUFA2O43678 99 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 PSPNO60542 156 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF737O75373 536 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 VSIG8P0DPA2 414 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 MGMTP16455 207 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 GALP22466 123 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 OR3A1P47881 315 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 DVL1P1P54792 670 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 DLX1P56177 255 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 RBM11P57052 281 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 VBP1P61758 197 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 UNC119Q13432 240 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ATXN7L3Q14CW9 347 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF146Q15072 292 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 TAF9Q16594 264 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 LRRC10Q5BKY1 277 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ATPAF1Q5TC12 328 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 DCAF12L2Q5VW00 463 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ELP2Q6IA86 826 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 Q6P435 159 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 C17orf107Q6ZR85 190 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 GPR141Q7Z602 305 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 FAM185AQ8N0U4 392 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 OR4S1Q8NGB4 309 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 OR4M1Q8NGD0 313 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 OR51D1Q8NGF3 324 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 TBC1D15Q8TC07 691 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 SELENOIQ9C0D9 397 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 C19orf12Q9NSK7 152 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 IL36GQ9NZH8 169 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 ST3GAL6Q9Y274 331 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 V9GY05 133 aa8.11□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A0A6YYD4 124 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 TRAV24A0A0B4J272 114 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 TRAV20A0A0B4J274 112 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 IGHV2-70DA0A0C4DH43 119 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 A8MV72 311 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 SLC33A1O00400 549 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 PDCD5O14737 125 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms