RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 DOCK7Q96N67 2140 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 PROK2Q9HC23 129 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 HSF4Q9ULV5 492 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 TRAV20A0A0B4J274 112 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 RD3LP0DJH9 198 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 CRYGSP22914 178 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 C9orf135Q5VTT2 229 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 OR1J1Q8NGS3 322 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 CXCL13O43927 109 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 ATP6V0CP27449 155 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 PSG4Q00888 419 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 HPSE2Q8WWQ2 592 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 NTNG2Q96CW9 530 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 PHF7Q9BWX1 381 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 GSN-AS1Q9NRJ2 163 aa8.01□□□□□ -1.13
LIMCH1-215ENST00000512632 SYNGR3O43761 229 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 PPYP01298 95 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 FBP1P09467 338 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 FKBP2P26885 142 aaKnown RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 RGS19P49795 217 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 DSCR4P56555 118 aaPredicted RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 CEACAM16Q2WEN9 425 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 RNF212Q495C1 297 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 MRPL14Q6P1L8 145 aaKnown RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 AAED1Q7RTV5 226 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 RPS19BP1Q86WX3 136 aaKnown RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 SUMF2Q8NBJ7 301 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 PBDC1Q9BVG4 233 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 SLC7A11Q9UPY5 501 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 URGCP-MRPS24S4R325 110 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF587BE7ETH6 402 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 C3orf80F5H4A9 247 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 SSSCA1O60232 199 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 PDCD6O75340 191 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 TCN2P20062 427 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 NKX2-1P43699 371 aaPredicted RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 IL13RA2Q14627 380 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 RAB35Q15286 201 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 P4HA3Q7Z4N8 544 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 TCEAL3Q969E4 200 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 ANGPTL4Q9BY76 406 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 PCED1AQ9H1Q7 454 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 SLC7A10Q9NS82 523 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 MIOXQ9UGB7 285 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 EXPH5Q8NEV8 1989 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 FREM2Q5SZK8 3169 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 C3orf85A0A1B0GTC6 90 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 IGSF23A1L1A6 192 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 UBE2CO00762 179 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 TOX3O15405 576 aaPredicted RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 OR2C1O95371 312 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 S100A12P80511 92 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 RUNX1Q01196 453 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF695Q8IW36 515 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 GPR137CQ8N3F9 429 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 OR14L1PQ8NHC6 308 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 MOB3AQ96BX8 217 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 C10orf35Q96D05 121 aa8□□□□□ -1.13
LIMCH1-215ENST00000512632 MRPS17Q9Y2R5 130 aaKnown RBP8□□□□□ -1.13
LIMCH1-215ENST00000512632 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 A0A0G2JMM0 328 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 A0A1W2PPB8 328 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 A0A1W2PRS3 328 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 KIR3DP1A8MWS1 328 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 MPPED1O15442 326 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 TRAPPC6AO75865 159 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 S100A8P05109 93 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 OR8U8P0C7N1 319 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 CCL4P13236 92 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 RAC1P63000 192 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 FOXL2NBQ6ZUU3 175 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 COMMD1Q8N668 190 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 NEK7Q8TDX7 302 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 NAT6Q93015 286 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF724A8MTY0 619 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 SSR4P51571 173 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 CARD18P57730 90 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 EIF3IQ13347 325 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 TMEM171Q8WVE6 324 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 BOD1Q96IK1 185 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 PAPOLGQ9BWT3 736 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 TMED3Q9Y3Q3 217 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 A0A087WZY1 265 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 K7N7A8 449 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 TNFSF12O43508 249 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 KLK3P07288 261 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 UMODP07911 640 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 JMJD7P0C870 316 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 CCL2P13500 99 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 FUT3P21217 361 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 GNRHRP30968 328 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 LHFPL2Q6ZUX7 228 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF611Q8N823 705 aa7.99□□□□□ -1.13
LIMCH1-215ENST00000512632 CCDC71LQ8N9Z2 235 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms