RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SIRT7Q9NRC8 400 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 MMP24Q9Y5R2 645 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 LMX1BO60663 402 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 SLC2A10O95528 541 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 CCL4P13236 92 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 LGALS3P17931 250 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 OR4X1Q8NH49 305 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ADGRL4Q9HBW9 690 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 PRSS37A4D1T9 235 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 J3QKU1 62 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 FGF17O60258 216 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 TRGV3P03979 118 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 JUNBP17275 347 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 CLPPQ16740 277 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 KIR3DL3Q8N743 410 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PRELID3AQ96N28 172 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 MKRN2Q9H000 416 aaKnown RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 PIPOXQ9P0Z9 390 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 GOLGA4Q13439 2230 aaKnown RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 LRRC10BA6NIK2 292 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 SNRPGP15A8MWD9 76 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 CEACAM4O75871 244 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 LIMS3P0CW19 117 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 LIMS4P0CW20 117 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 FUT3P21217 361 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 COL8A1P27658 744 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 LCN2P80188 198 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 SLC10A2Q12908 348 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 TMEM177Q53S58 311 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 NANOGP1Q8N7R0 232 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PSD2Q9BQI7 771 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PAXXQ9BUH6 204 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 DCAF13Q9NV06 445 aaKnown RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 R4GMQ9 66 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 HAND1O96004 215 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 FABP4P15090 132 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 CAMPP49913 170 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 YIPF6Q96EC8 236 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 GSX1Q9H4S2 264 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 SLC6A13Q9NSD5 602 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 SPATA31D1Q6ZQQ2 1576 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 IGHV1OR21-1A0A087WYE8 117 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PPIAL4CA0A0B4J2A2 164 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 FITM1A5D6W6 292 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 TMEM235A6NFC5 223 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PPIAL4GP0DN37 164 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 RAG2P55895 527 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 SSX1Q16384 188 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 DUSP5Q16690 384 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PMS2CLQ68D20 193 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 ZNF774Q6NX45 483 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 INO80CQ6PI98 192 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 LYPD4Q6UWN0 246 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 OR52B4Q8NGK2 314 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 OR2Y1Q8NGV0 311 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 OR2A25A4D2G3 310 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 TNFSF10P50591 281 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 TDGF1P3P51864 188 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 ARF6P62330 175 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 RPL18Q07020 188 aaKnown RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 NPWQ8N729 165 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 FAM181AQ8N9Y4 354 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 LINC00615Q96LM1 132 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 WNT10AQ9GZT5 417 aa7.91□□□□□ -1.14
VCAN-208ENST00000512590 C19orf53Q9UNZ5 99 aaPredicted RBP7.91□□□□□ -1.14
VCAN-208ENST00000512590 TRGV4A0A0C4DH28 118 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 TRBV4-1A0A0J9YWV2 114 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 MFNGO00587 321 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 MPZL1O95297 269 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 PWWP2BQ6NUJ5 590 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 MCHR2Q969V1 340 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 MBLAC1A4D2B0 266 aaPredicted RBP7.9□□□□□ -1.14
VCAN-208ENST00000512590 ZNF32P17041 273 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 DEFA6Q01524 100 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 ZNF154Q13106 437 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 DHRS2Q13268 280 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 NSUN5P2Q63ZY6 315 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 FBXO8Q9NRD0 319 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 GMPR2Q9P2T1 348 aaKnown RBP7.9□□□□□ -1.14
VCAN-208ENST00000512590 RFPL4AA6NLU0 287 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 RFPL4AL1F8VTS6 287 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 ABLIM3O94929 683 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 HTR1FP30939 366 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 PDCD1Q15116 288 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 FAM166AQ6J272 317 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 FAM159AQ6UWV7 190 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 GBGT1Q8N5D6 347 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 R3HDM4Q96D70 268 aa7.9□□□□□ -1.14
VCAN-208ENST00000512590 ZC3H12DA2A288 527 aaKnown RBP7.9□□□□□ -1.15
VCAN-208ENST00000512590 C9JCJ5 164 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 PMS2P2O95744 297 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 CD8AP01732 235 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 ISG15P05161 165 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 GDNFP39905 211 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 RFLNAQ6ZTI6 216 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 MRGPREQ86SM8 312 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 ABHD3Q8WU67 409 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms