RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MROQ9BYG7 248 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 KCNJ16Q9NPI9 418 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMEM9BQ9NQ34 198 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMEM45AQ9NWC5 275 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 ST3GAL6Q9Y274 331 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 RPL36Q9Y3U8 105 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 A0A087WX48 190 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 NPIPB7O75200 414 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 RPLP0P05388 317 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 CRYGDP07320 174 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 PHBP35232 272 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TFPI2P48307 235 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 DLX1P56177 255 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 GNG5P63218 68 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 BAMBIQ13145 260 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 KIAA0141Q14154 515 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TCTEX1D4Q5JR98 221 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 C1orf189Q5VU69 101 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TMPPEQ6ZT21 453 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 DAW1Q8N136 415 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF557Q8N988 423 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 APOBEC3DQ96AK3 386 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 C2orf48Q96LS8 159 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 TM2D1Q9BX74 207 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 EXOSC4Q9NPD3 245 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 IGSF9BQ9UPX0 1349 aa5.16□□□□□ -1.58
TRAPPC11-209ENST00000512476 PLXNB2O15031 1838 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 DOCK5Q9H7D0 1870 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 A0A1W2PRG6 482 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 DIRC3C9JPN6 131 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF593O00488 134 aaPredicted RBP5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 HMGB3O15347 200 aaKnown RBP5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 CHST10O43529 356 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 GNG7O60262 68 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 ATG12O94817 140 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 CSF3P09919 207 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 HSD17B1P14061 328 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 CXCL2P19875 107 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 TSPOP30536 169 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 TBPL1P62380 186 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 ZNF91Q05481 1191 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 TNFAIP8L3Q5GJ75 292 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 SPSB3Q6PJ21 355 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 UMODL1-AS1Q8N2C9 162 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 SPACA5Q96QH8 159 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 MND1Q9BWT6 205 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 SLC2A6Q9UGQ3 507 aa5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 RALYQ9UKM9 306 aaKnown RBP5.15□□□□□ -1.58
TRAPPC11-209ENST00000512476 LOC102724200A0A096LPH7 203 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 IGKV6D-21A0A0A0MT36 114 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 PFN1P07737 140 aaKnown RBP5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 COL8A1P27658 744 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 GAGE5Q13069 117 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 GAGE6Q13070 117 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 SLC25A35Q3KQZ1 300 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 PYCR3Q53H96 274 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 TPTE2P1Q5T6R2 138 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 ATP1A1-AS1Q5TC04 95 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 DCUN1D2Q6PH85 259 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 OPN5Q6U736 354 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 TMEM207Q6UWW9 146 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 RGP1Q92546 391 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 TCEAL7Q9BRU2 100 aa5.15□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF236Q9UL36 1845 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNFX1Q9P2E3 1918 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 TRBV5-3A0A0A0MS03 114 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 A0A0G2JLM5 398 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR5H1A6NKK0 313 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 G3V2L1 256 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 G3V2T6 193 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 GYG2O15488 501 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 CRXO43186 299 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 SLC2A10O95528 541 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 IFNA10P01566 189 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 THY1P04216 161 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 FAM106CPP0CH98 169 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR13C7P0DN81 318 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 HIST1H1TP22492 207 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 GNLYP22749 145 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 GPR183P32249 361 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ARL2P36404 184 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 FKBP3Q00688 224 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF720Q7Z2F6 126 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 TMEM219Q86XT9 240 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR51G1Q8NGK1 321 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 APOBEC4Q8WW27 367 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 SRSF12Q8WXF0 261 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 KLK6Q92876 244 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 STMN2Q93045 179 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 GMPPAQ96IJ6 420 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 BTF3L4Q96K17 158 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 TBL1XR1Q9BZK7 514 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PYCARDQ9ULZ3 195 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PLXNA1Q9UIW2 1896 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZMYM2Q9UBW7 1377 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNHIT1O43257 154 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 ZNF623O75123 536 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 CLDN1O95832 211 aa5.14□□□□□ -1.59
TRAPPC11-209ENST00000512476 PTH2RP49190 550 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms