RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	SMURF1	Q9HCE7	757 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	ACOT13	Q9NPJ3	140 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	SNTG1	Q9NSN8	517 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	SLC25A10	Q9UBX3	287 aa	Predicted RBP	6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR14J1	Q9UGF5	321 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	FOXJ3	Q9UPW0	622 aa		6.23	□□□□□ -1.41
NR1I3-231	ENST00000512340	NBEAL1	Q6ZS30	2694 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TRBV5-5	A0A0J9YX44	114 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	RFPL4A	A6NLU0	287 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	DBX1	A6NMT0	343 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	RFPL4AL1	F8VTS6	287 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	SSX5	O60225	188 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	GPX5	O75715	221 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	CRTAP	O75718	401 aa	Predicted RBP	6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	RHBDL1	O75783	438 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	KDM4B	O94953	1096 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	S100A9	P06702	114 aa	Known RBP	6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	PSG2	P11465	335 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	FST	P19883	344 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	KRTAP1-1	Q07627	177 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TPBG	Q13641	420 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	COTL1	Q14019	142 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	PDCD1	Q15116	288 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	ACSM3	Q53FZ2	586 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	LAIR2	Q6ISS4	152 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	MZT2A	Q6P582	158 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF788	Q6ZQV5	615 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	GDPD3	Q7L5L3	318 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	BPIFB2	Q8N4F0	458 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	JAGN1	Q8N5M9	183 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZFP41	Q8N8Y5	198 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	ASCC1	Q8N9N2	400 aa	Known RBP	6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	C19orf18	Q8NEA5	215 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	PXT1	Q8NFP0	134 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR5T2	Q8NGG2	359 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR51A4	Q8NGJ6	313 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR10AC1	Q8NH08	325 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TNFAIP8L1	Q8WVP5	186 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	BORCS5	Q969J3	196 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	SLAMF9	Q96A28	289 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	SDSL	Q96GA7	329 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	SNX22	Q96L94	193 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMEM68	Q96MH6	324 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	MGLL	Q99685	303 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMED9	Q9BVK6	235 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	SUCNR1	Q9BXA5	334 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	PPP1R3E	Q9H7J1	279 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	CNTD2	Q9H8S5	307 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	EXOSC4	Q9NPD3	245 aa	Known RBP	6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	TAS2R4	Q9NYW5	299 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	GHRL	Q9UBU3	117 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	INSIG2	Q9Y5U4	225 aa		6.22	□□□□□ -1.41
NR1I3-231	ENST00000512340	MXRA5	Q9NR99	2828 aa		6.21	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A0A6YYJ9	748 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	PDCD5	O14737	125 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	SYNGR1	O43759	233 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	RGS9	O75916	674 aa	Predicted RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	TOX4	O94842	621 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	TNFAIP8	O95379	198 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	HAND1	O96004	215 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	UBB	P0CG47	229 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF44	P15621	663 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	CPE	P16870	476 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	EGR1	P18146	543 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	GABRR1	P24046	479 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	MYL9	P24844	172 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZFP36	P26651	326 aa	Known RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	GABRA5	P31644	462 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	PTGFR	P43088	359 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	TSPAN5	P62079	268 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	RPL31	P62899	125 aa	Known RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	GUCA2A	Q02747	115 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	MEF2C	Q06413	473 aa	Predicted RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	IRF3	Q14653	427 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	FAM189A2	Q15884	450 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	KCTD21	Q4G0X4	260 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	AARD	Q4LEZ3	155 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	HSD17B12	Q53GQ0	312 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	DMRTC1	Q5HYR2	192 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	FAM209B	Q5JX69	171 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	LIPK	Q5VXJ0	399 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	NCR3LG1	Q68D85	454 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	C11orf88	Q6PI97	169 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	LYPD2	Q6UXB3	125 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	C1orf122	Q6ZSJ8	110 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	C1QL2	Q7Z5L3	287 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	CEACAM19	Q7Z692	300 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	LINC00596	Q86U02	117 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	CALHM1	Q8IU99	346 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	KIR3DL3	Q8N743	410 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	FAM216B	Q8N7L0	139 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF485	Q8NCK3	441 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	OR51A2	Q8NGJ7	313 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	RNF166	Q96A37	237 aa	Predicted RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	MRPS24	Q96EL2	167 aa	Known RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	CMTM3	Q96MX0	182 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	DERL3	Q96Q80	235 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	OR14A2	Q96R54	314 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	MDFI	Q99750	246 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	DCTN5	Q9BTE1	182 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms