RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SNU13P55769 128 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 MEF2CQ06413 473 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 FOXL1Q12952 345 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 ELP2Q6IA86 826 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 FIP1L1Q6UN15 594 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 OR13C5Q8NGS8 318 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 SSMEM1Q8WWF3 244 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 ORAI1Q96D31 301 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 CHIAQ9BZP6 476 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 TNFRSF19Q9NS68 423 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PR64 198 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PRV1 198 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 MGST3O14880 152 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 MAGEB3O15480 346 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 OR2H2O95918 312 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 IGHV4-59P01825 116 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 CDK1P06493 297 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 GABRR1P24046 479 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 ERP29P30040 261 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 OR3A1P47881 315 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 EDDM3BP56851 147 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 GRK1Q15835 563 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 MIDNQ504T8 468 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 CHST6Q9GZX3 395 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 TMEM138Q9NPI0 162 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 PCDHGB5Q9Y5G0 923 aa13.15□□□□□ -0.3
PDLIM5-216ENST00000511767 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 MEX3AA1L020 520 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 SIRPB1O00241 398 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 GABRPO00591 440 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 DEGS1O15121 323 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 FBP1P09467 338 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 CELP19835 753 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 MYF6P23409 242 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 SAA4P35542 130 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 TGFBR2P37173 567 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 PTGFRP43088 359 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 MTNR1BP49286 362 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 WNT4P56705 351 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 SCN1BQ07699 218 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 Q499Y3 187 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 TPRX1Q8N7U7 411 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 PPP1R35Q8TAP8 253 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 SGCDQ92629 289 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 CDCA4Q9BXL8 241 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 ERGIC3Q9Y282 383 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 DSCAML1Q8TD84 2053 aa13.14□□□□□ -0.31
PDLIM5-216ENST00000511767 A0A1W2PPK0 400 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 hADV38S2A0JD32 116 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 PIN1P1O15428 100 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 BDKRB2P30411 391 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 BMXP51813 675 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 TAS2R43P59537 309 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 EDDM3AQ14507 147 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 IRF3Q14653 427 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 TAF9Q16594 264 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 TNFAIP8L1Q8WVP5 186 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 CORO2AQ92828 525 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 MYDGFQ969H8 173 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 GPER1Q99527 375 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 NKX3-1Q99801 234 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 PAK1IP1Q9NWT1 392 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 ING4Q9UNL4 249 aa13.13□□□□□ -0.31
PDLIM5-216ENST00000511767 TRAV8-7A0A075B6U6 113 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 FAM90A8PA6NJQ4 464 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 POM121CA8CG34 1229 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 H0YHG0 523 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 CDRT1O95170 752 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 RBP4P02753 201 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF93P35789 620 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 SLC35A2P78381 396 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 RELBQ01201 579 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 AESQ08117 197 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 RIPK1Q13546 671 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 CHST4Q8NCG5 386 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 DYRK2Q92630 601 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNF747Q9BV97 191 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
PDLIM5-216ENST00000511767 ZNRD1Q9P1U0 126 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms