RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PTP4A1Q93096 173 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 DERL3Q96Q80 235 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ZNF385DQ9H6B1 395 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 PARP11Q9NR21 331 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 PLXNA1Q9UIW2 1896 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 A1L4Q6 167 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 SMLR1H3BR10 107 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 BCL3P20749 454 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ACAA2P42765 397 aaKnown RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 CEBPDP49716 269 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 ERVFRD-1P60508 538 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 TAGLNQ01995 201 aaKnown RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 PDZK1IP1Q13113 114 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ANKRD55Q3KP44 614 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 TM4SF20Q53R12 229 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 PWWP2BQ6NUJ5 590 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 CENPVQ7Z7K6 275 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 OR2Y1Q8NGV0 311 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ZNF596Q8TC21 504 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 METTL26Q96S19 204 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 IL21Q9HBE4 155 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 MPC1Q9Y5U8 109 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 U3KQ87 197 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 TRIP12Q14669 1992 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 A0A1W2PS18 150 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 HOXC4P09017 264 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 CAMPP49913 170 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 SPANXN1Q5VSR9 72 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 LINC00299Q6ZSB3 139 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 OR2G2Q8NGZ5 317 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 FLYWCH2Q96CP2 140 aaKnown RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 C11orf54Q9H0W9 315 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 KCNK15Q9H427 330 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 MSL2Q9HCI7 577 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 LPAR3Q9UBY5 353 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ANXA10Q9UJ72 324 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 KCNAB3O43448 404 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 ZNF324O75467 553 aaPredicted RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 LALBAP00709 142 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 G6PCP35575 357 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 C1orf185Q5T7R7 199 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 STAC2Q6ZMT1 411 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 LYSMD2Q8IV50 215 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 C20orf196Q8IYI0 205 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 NANOGP1Q8N7R0 232 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 LSMEM1Q8N8F7 131 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 SYT8Q8NBV8 401 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 MCHR2Q969V1 340 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 OR10C1Q96KK4 312 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 C20orf141Q9NUB4 165 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 YBX2Q9Y2T7 364 aaKnown RBP5.13□□□□□ -1.59
USP38-203ENST00000511739 TRAPPC1Q9Y5R8 145 aa5.13□□□□□ -1.59
USP38-203ENST00000511739 PPIAL4EA0A075B759 164 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PPIAL4DF5H284 164 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 MPDU1O75352 247 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 FAM106CPP0CH98 169 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 APELAP0DMC3 54 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PPIAL4FP0DN26 164 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 AVPR2P30518 371 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CCR2P41597 374 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 ZNF154Q13106 437 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 EIF4EBP2Q13542 120 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 OR10A7Q8NGE5 316 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 DOK1Q99704 481 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PPIAL4AQ9Y536 164 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 LRP12Q9Y561 859 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 IGKV3D-11A0A0A0MRZ8 115 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 MFSD2BA6NFX1 497 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CDRT15L2A8MXV6 281 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 DHRS3O75911 302 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PTBP3O95758 552 aaKnown RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 CD3DP04234 171 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 IGKV3-11P04433 115 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CSN3P07498 182 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 ETV1P50549 477 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 NKG7Q16617 165 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 MRGPREQ86SM8 312 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 TBC1D26Q86UD7 250 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 FAM219AQ8IW50 185 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 FAM222BQ8WU58 562 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 STARD4Q96DR4 205 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SMIM19Q96E16 107 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SLC25A33Q9BSK2 321 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 ZNF629Q9UEG4 869 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 CBY3A6NI87 242 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 RER1O15258 196 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 HOXD4P09016 255 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 CCL4P13236 92 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 RANP62826 216 aaKnown RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 HLXQ14774 488 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 LGALSLQ3ZCW2 172 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 KRTCAP3Q53RY4 240 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SHISA5Q8N114 240 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 GPR137Q96N19 417 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 RAB40CQ96S21 281 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 GPX7Q96SL4 187 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 KNL1Q8NG31 2342 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CACNA1GO43497 2377 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 EPPINO95925 133 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms