RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 GJC3Q8NFK1 279 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 C14orf79Q96F83 325 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 PGAM5Q96HS1 289 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 NKX3-1Q99801 234 aaPredicted RBP11.16□□□□□ -0.62
HMGB2-205ENST00000511316 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 CHST5Q9GZS9 411 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 NECAP2Q9NVZ3 263 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 B3GAT1Q9P2W7 334 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 V9GYS6 101 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 HIVEP3Q5T1R4 2406 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 CACNA1CQ13936 2221 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 EML6Q6ZMW3 1958 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 A0A087WZY1 265 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 ADAM10O14672 748 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 NME2P1O60361 137 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 VAMP5O95183 116 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 HOXB5P09067 269 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 ZNF43P17038 809 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 NME2P22392 152 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 TMEM33P57088 247 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 SLC35A1P78382 337 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 PMP22Q01453 160 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 GALNTL5Q7Z4T8 443 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 SLC22A8Q8TCC7 542 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 RPS10P5Q9NQ39 176 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 FAM96BQ9Y3D0 163 aa11.16□□□□□ -0.62
HMGB2-205ENST00000511316 ESPL1Q14674 2120 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 IGKV1D-43A0A0B4J1Z2 117 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 PINLYPA6NC86 204 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 SGCEO43556 437 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 RAD51DO75771 328 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 EIF3GO75821 320 aaKnown RBP eCLIP11.15□□□□□ -0.626e-10■□□□□ 10
HMGB2-205ENST00000511316 ZNF14P17017 642 aaPredicted RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 MSR1P21757 451 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 GLRA1P23415 457 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 DUSP1P28562 367 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 KCNJ3P48549 501 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 SSR4P51571 173 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 UCP3P55916 312 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 MYBPHQ13203 477 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 MRPL49Q13405 166 aaKnown RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 ZNF266Q14584 549 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 OR8B8Q15620 311 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 GUK1Q16774 197 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 ABCA11PQ4W5N1 156 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 OTPQ5XKR4 325 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 SEMA6DQ8NFY4 1073 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 OR51F2Q8NH61 342 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 FAM71F1Q96KD3 344 aaPredicted RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 ADAT1Q9BUB4 502 aaKnown RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 ANGPTL4Q9BY76 406 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 BANF2Q9H503 90 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.62
HMGB2-205ENST00000511316 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 KLRF1Q9NZS2 232 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.62
HMGB2-205ENST00000511316 ZGRF1Q86YA3 2104 aa11.15□□□□□ -0.63
HMGB2-205ENST00000511316 HPNP05981 417 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 CHATP28329 748 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 CAMLGP49069 296 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 FOXO1Q12778 655 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 RSU1Q15404 277 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
HMGB2-205ENST00000511316 PLPPR5Q32ZL2 321 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 C10orf128Q5T292 105 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 GGNBP1Q5YKI7 109 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 FOXL2NBQ6ZUU3 175 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
HMGB2-205ENST00000511316 LGI3Q8N145 548 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 LRRC18Q8N456 261 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 SPTSSAQ969W0 71 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 TECTBQ96PL2 329 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 METTL9Q9H1A3 318 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 TMPRSS5Q9H3S3 457 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 PNRC2Q9NPJ4 139 aaKnown RBP11.14□□□□□ -0.63
HMGB2-205ENST00000511316 PLEKHJ1Q9NW61 149 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 ANXA10Q9UJ72 324 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 AMDHD2Q9Y303 409 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 TMED3Q9Y3Q3 217 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 CHCHD2Q9Y6H1 151 aaPredicted RBP11.14□□□□□ -0.63
HMGB2-205ENST00000511316 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
HMGB2-205ENST00000511316 LRRK2Q5S007 2527 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 AQP7P3A6NL99 342 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 H7C1Q1 480 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 WRBO00258 174 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 ST8SIA3O43173 380 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 TGOLN2O43493 480 aa11.14□□□□□ -0.63
HMGB2-205ENST00000511316 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms