RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 PABPC1L2AQ5JQF8 200 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 RIPPLY2Q5TAB7 128 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 TMEM42Q69YG0 159 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 PCSK4Q6UW60 755 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 AAED1Q7RTV5 226 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 TUSC5Q8IXB3 177 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 MAFIPQ8WZ33 124 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 CYYR1Q96J86 154 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 TECTBQ96PL2 329 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 TSNAXQ99598 290 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 ZNF2Q9BSG1 426 aaPredicted RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 IL36GQ9NZH8 169 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 CLCF1Q9UBD9 225 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 IFNA21P01568 189 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 GAPDHP04406 335 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 ACKR3P25106 362 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 NTF4P34130 210 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 ACSF3Q4G176 576 aaPredicted RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 GFRALQ6UXV0 394 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 POM121Q96HA1 1249 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 SMIM8Q96KF7 97 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 RNF122Q9H9V4 155 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 CALHM2Q9HA72 323 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 BCO1Q9HAY6 547 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 NECAP2Q9NVZ3 263 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 PRR13Q9NZ81 148 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 ZNF629Q9UEG4 869 aaPredicted RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 PURGQ9UJV8 347 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 PRELID1Q9Y255 219 aa13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 NOSIPQ9Y314 301 aaKnown RBP13.84□□□□□ -0.19
SQSTM1-213ENST00000510187 IGKV1D-8A0A087WSZ0 117 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 ZNF724A8MTY0 619 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 KNG1P01042 644 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 HOXB5P09067 269 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 RBP2P50120 134 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 S100A10P60903 97 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 PCBD1P61457 104 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 PJVKQ0ZLH3 352 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 BHLHE23Q8NDY6 225 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 OR51F2Q8NH61 342 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 ZNF837Q96EG3 531 aaPredicted RBP13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 PCDHB16Q9NRJ7 776 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 SPTA1P02549 2419 aa13.83□□□□□ -0.2
SQSTM1-213ENST00000510187 ATP6V1G2-DDX39BF2Z307 99 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 MRPL33O75394 65 aaKnown RBP13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 OR5H8P0DN80 308 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 HKR1P10072 659 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 CHATP28329 748 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 IAH1Q2TAA2 248 aaPredicted RBP13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 DMRTC1Q5HYR2 192 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 ZNF774Q6NX45 483 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 DHRS11Q6UWP2 260 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 FAM57AQ8TBR7 257 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 BORCS8Q96FH0 119 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 CMSS1Q9BQ75 279 aaKnown RBP13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 AK3Q9UIJ7 227 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 TIMM10BQ9Y5J6 103 aa13.82□□□□□ -0.2
SQSTM1-213ENST00000510187 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 FAM74A7A6NL05 159 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 ZNF705EA8MWA4 302 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 NUPL2O15504 423 aaKnown RBP13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 WDR1O75083 606 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 DEDDO75618 318 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 CST4P01036 141 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 SFTPBP07988 381 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 FCGR3AP08637 254 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 H2AFB1P0C5Y9 115 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 PMELP40967 661 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 MST1LQ2TV78 715 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 FAM74A3Q4VXF1 159 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 WNT2BQ93097 391 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 GALNT14Q96FL9 552 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 CRLF2Q9HC73 371 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 GP6Q9HCN6 339 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 PARPBPQ9NWS1 579 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 GSKIPQ9P0R6 139 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 ATRXP46100 2492 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 IGKV1-27A0A075B6S5 117 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 FAM230AA0A1W2PPH8 454 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 MSTNO14793 375 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 NRASP01111 189 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 LCATP04180 440 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 HTR5AP47898 357 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 BLOC1S1P78537 153 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 HGFACQ04756 655 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 OR8B8Q15620 311 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 NRN1LQ496H8 165 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 TMEM200AQ86VY9 491 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 SPAG16Q8N0X2 631 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 LRTM2Q8N967 370 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 OR2AE1Q8NHA4 323 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 GMPPAQ96IJ6 420 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 HDHD3Q9BSH5 251 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 SEC11CQ9BY50 192 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 TAF9BQ9HBM6 251 aa13.81□□□□□ -0.2
SQSTM1-213ENST00000510187 GLRX2Q9NS18 164 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms