RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 HIKESHIQ53FT3 197 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TPGS2Q68CL5 300 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.19□□□□□ -1.9
USP53-205ENST00000509769 PTOV1Q86YD1 416 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR10G9Q8NGN4 311 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR10G7Q8NGN6 311 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR10J6PQ8NGY7 276 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 FGF13Q92913 245 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LSM10Q969L4 123 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 CHCHD1Q96BP2 118 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 DNAJC30Q96LL9 226 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MRPL20Q9BYC9 149 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 SLC25A18Q9H1K4 315 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 R3HDMLQ9H3Y0 253 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 PLSCR2Q9NRY7 297 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 DSPPQ9NZW4 1301 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TRBV23-1A0A0A0MS06 115 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 A0A1W2PRD5 423 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TMEM150BA6NC51 233 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 F8W1H4 67 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MEIS2O14770 477 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MLNRO43193 412 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 NDUFA2O43678 99 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SYNGR2O43760 224 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TSPAN2O60636 221 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CA11O75493 328 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TIMP1P01033 207 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ELAVL4P26378 380 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 ACRV1P26436 265 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SSTR5P35346 364 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SRYQ05066 204 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MESTQ5EB52 335 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 FNDC7Q5VTL7 733 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CGB2Q6NT52 195 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 DLEU7Q6UYE1 221 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LIAT1Q6ZQX7 453 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OSTM1Q86WC4 334 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TCEAL8Q8IYN2 117 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 UMODL1-AS1Q8N2C9 162 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ZNF511Q8NB15 262 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR9G1Q8NH87 305 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR1F12Q8NHA8 337 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 DIO2Q92813 273 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 NEURL3Q96EH8 262 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 KCNS1Q96KK3 526 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SOSTQ9BQB4 213 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 WDR13Q9H1Z4 485 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 AUNIPQ9H7T9 357 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ISG20L2Q9H9L3 353 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 GIMAP2Q9UG22 337 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CLEC2DQ9UHP7 191 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MMP17Q9ULZ9 603 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 VSIG4Q9Y279 399 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CACNA1SQ13698 1873 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SMIM35A0A1B0GVV1 85 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 UPK3BL1B0FP48 263 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TMEM233B4DJY2 109 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 UPK3BL2E5RIL1 263 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 M0QZ24 198 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 PLPP2O43688 288 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SSSCA1O60232 199 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 FCMRO60667 390 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ALOX12BO75342 701 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 GDF1P27539 372 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR3A4PP47883 348 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 GDF10P55107 478 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CLDN17P56750 224 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LINC00303Q3SY05 128 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LDLRAD2Q5SZI1 272 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ACSM5Q6NUN0 579 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CPEB2Q7Z5Q1 589 aaKnown RBP3.19□□□□□ -1.9
USP53-205ENST00000509769 RIMKLAQ8IXN7 391 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 LILRA2Q8N149 483 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 CYB561A3Q8NBI2 242 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 PRSS33Q8NF86 280 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 GJC3Q8NFK1 279 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR5AN1Q8NGI8 311 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR1K1Q8NGR3 316 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OR2T6Q8NHC8 308 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TMEM174Q8WUU8 243 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TMEM170AQ8WVE7 144 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 ARPC1AQ92747 370 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SPSB4Q96A44 273 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 RSRP1Q9BUV0 290 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 MFRPQ9BY79 579 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TWSG1Q9GZX9 223 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 BCL2L10Q9HD36 194 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OBP2BQ9NPH6 170 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 SLC2A4RGQ9NR83 387 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 OBP2AQ9NY56 170 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 FAM198AQ9UFP1 575 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 KLF12Q9Y4X4 402 aa3.19□□□□□ -1.9
USP53-205ENST00000509769 TMEM272A0A1B0GTI8 110 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 H3BQ85 93 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SDCBPO00560 298 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 WNT10BO00744 389 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TMPRSS11DO60235 418 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TNFP01375 233 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms