RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 LIPNQ5VXI9 398 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 PLCXD3Q63HM9 321 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 LPCAT4Q643R3 524 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 WDR82Q6UXN9 313 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 BTN2A1Q7KYR7 527 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 CATSPERDQ86XM0 798 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZDHHC23Q8IYP9 409 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ELMOD2Q8IZ81 293 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 MUC20Q8N307 709 aaPredicted RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 PRSS35Q8N3Z0 413 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 BPIFB2Q8N4F0 458 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 FAM216BQ8N7L0 139 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SIGLECL1Q8N7X8 197 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 OR8J1Q8NGP2 316 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OR2T27Q8NH04 317 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 NPRL2Q8WTW4 380 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 HPSE2Q8WWQ2 592 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RORBQ92753 470 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ERGIC1Q969X5 290 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RAB3IPQ96QF0 476 aaPredicted RBP3.73□□□□□ -1.81
NUP54-206ENST00000508465 PCGF1Q9BSM1 259 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RTL8AQ9BWD3 113 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 PRRG3Q9BZD7 231 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OR51I2Q9H344 312 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 GHITMQ9H3K2 345 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 RGCCQ9H4X1 137 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 NIPAL2Q9H841 368 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ESM1Q9NQ30 184 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 TNFRSF19Q9NS68 423 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 FAM118AQ9NWS6 357 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 HAO2Q9NYQ3 351 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 USE1Q9NZ43 259 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ERVK-18Q9QC07 812 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 CLN8Q9UBY8 286 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 ZNF391Q9UJN7 358 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 GNG8Q9UK08 70 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 GMPPBQ9Y5P6 360 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 MPC1Q9Y5U8 109 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 SNX5Q9Y5X3 404 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 R4GMQ9 66 aa3.73□□□□□ -1.81
NUP54-206ENST00000508465 TANC2Q9HCD6 1990 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 IGKV1D-17A0A075B6S4 117 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 PPIAL4CA0A0B4J2A2 164 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ZNF816-ZNF321PA0A0X1KG74 233 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 LOC100130705A0A1B0GUX0 176 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 MDFIC2A0A1B0GVS7 189 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 MEX3AA1L020 520 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A18PA6NE21 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A16PA6NEW6 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ANXA2P2A6NMY6 339 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 OR2AT4A6NND4 320 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A9PA6NNJ1 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A5PA8MXJ8 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 E9PI62 339 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 E9PQ18 207 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 F8VVB4 439 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 F8VWA3 439 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 J3QRE1 110 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 DLGAP1O14490 977 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 CLIC3O95833 236 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 SCGB1D1O95968 90 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 KRT8P05787 483 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 CSF1P09603 554 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A15PP0C7V4 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM90A14PP0C7W9 464 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 PSG2P11465 335 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 DCTDP32321 178 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 KIR3DL2P43630 455 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 TGM4P49221 684 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 CEBPDP49716 269 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 GNG3P63215 75 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 TBCEQ15813 527 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 UBE2V2Q15819 145 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 KCNJ8Q15842 424 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ZNF829Q3KNS6 432 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 CEACAM21Q3KPI0 293 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ARMCX4Q5H9R4 360 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 FAM76BQ5HYJ3 339 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 CLVS2Q5SYC1 327 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 DGAT2L7PQ6IED9 249 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 HAGHLQ6PII5 290 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 BTNL3Q6UXE8 466 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 BRD3OSQ6XYD6 125 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 RNF144BQ7Z419 303 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 C10orf67Q8IYJ2 551 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ENTHD1Q8IYW4 607 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 CD177Q8N6Q3 437 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 ZDHHC22Q8N966 263 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 OR5A2Q8NGI9 324 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 OR2G2Q8NGZ5 317 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 OR10AC1Q8NH08 325 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 RHOXF1Q8NHV9 184 aa3.72□□□□□ -1.81
NUP54-206ENST00000508465 TRMT10AQ8TBZ6 339 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 ZNF418Q8TF45 676 aaPredicted RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 TRUB1Q8WWH5 349 aaKnown RBP3.72□□□□□ -1.81
NUP54-206ENST00000508465 CYGBQ8WWM9 190 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms