RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OR4C6Q8NH72 309 aa6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 BIRC8Q96P09 236 aa6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 RIOK2Q9BVS4 552 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 SLC17A9Q9BYT1 436 aa6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 UBE2TQ9NPD8 197 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF230Q9UIE0 474 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 BAIAP2Q9UQB8 552 aa6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
PDGFRA-206ENST00000508170 TCRBV5S1A1TA0A578 114 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 H3BSA7 217 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF207O43670 478 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 SCO1O75880 301 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CDS2O95674 445 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 FGF1P05230 155 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 PFN1P07737 140 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CHRNB4P30926 498 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 GPR183P32249 361 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 BIDP55957 195 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 RAB5BP61020 215 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 RPL18AQ02543 176 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ECH1Q13011 328 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 TAB1Q15750 504 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 MLANAQ16655 118 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CDNFQ49AH0 187 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 TEX36Q5VZQ5 186 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 PVRIGQ6DKI7 326 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF549Q6P9A3 640 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ALKAL1Q6UXT8 129 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 OR2K2Q8NGT1 345 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CANT1Q8WVQ1 401 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 TRUB1Q8WWH5 349 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 DNAJA3Q96EY1 480 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 C7orf69Q9H7B7 122 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ZDHHC11Q9H8X9 412 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CISHQ9NSE2 258 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 NUDT4Q9NZJ9 180 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF780BQ9Y6R6 833 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 MYH7BA7E2Y1 1941 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 MYH1P12882 1939 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 NKX2-6A6NCS4 301 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 GCM2O75603 506 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 FASTKQ14296 549 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 DUSP5Q16690 384 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CLEC12BQ2HXU8 276 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ATP6AP1LQ52LC2 224 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 CTAGE3PQ8IX95 158 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 UBALD2Q8IYN6 164 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 SLC30A7Q8NEW0 376 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 GPR119Q8TDV5 335 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 DCAKDQ8WVC6 231 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 REEP6Q96HR9 211 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF354BQ96LW1 612 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 OR7D2Q96RA2 312 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 C19orf73Q9NVV2 129 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 COMMD9Q9P000 198 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 POLR1DQ9Y2S0 133 aa6.25□□□□□ -1.41
PDGFRA-206ENST00000508170 NCBP2LA6PVI3 153 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 MRASO14807 208 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 ICOSLGO75144 302 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 RDH16O75452 317 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 IFNA17P01571 189 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF30P17039 623 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 RAB5AP20339 215 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 APLNRP35414 380 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 HSPE1P61604 102 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 SNRPD1P62314 119 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 PPP3R1P63098 170 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 REP15Q6BDI9 236 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 DEFB132Q7Z7B7 95 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 ZNF557Q8N988 423 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 CHST4Q8NCG5 386 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 TSTD1Q8NFU3 115 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 TMED6Q8WW62 240 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 CCDC115Q96NT0 180 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 CEP350Q5VT06 3117 aa6.24□□□□□ -1.41
PDGFRA-206ENST00000508170 OR5H15A6NDH6 313 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 TCP10L2B9ZVM9 353 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 SHBGP04278 402 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 TDGF1P3P51864 188 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 LIM2P55344 173 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 GNG5P63218 68 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 RIGQ13278 110 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 CLINT1Q14677 625 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 UNC50Q53HI1 259 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 AKR1C8PQ5T2L2 129 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 SMIM5Q71RC9 77 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 CHMP1BQ7LBR1 199 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 DCUN1D1Q96GG9 259 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 HSPB9Q9BQS6 159 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 MBNL3Q9NUK0 354 aaKnown RBP6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 NAV1Q8NEY1 1877 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 SBF2Q86WG5 1849 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 A0A087WZ39 114 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 SNURFLB1AK76 121 aa6.23□□□□□ -1.41
PDGFRA-206ENST00000508170 G3V2L1 256 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms