RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 THAP7Q9BT49 309 aaPredicted RBP5.46□□□□□ -1.54
VCAN-207ENST00000507162 WFDC10AQ9H1F0 79 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 RGCCQ9H4X1 137 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 OR6C3Q9NZP0 311 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 SLC7A11Q9UPY5 501 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 FBXO7Q9Y3I1 522 aa5.46□□□□□ -1.54
VCAN-207ENST00000507162 AMMECR1Q9Y4X0 333 aaPredicted RBP5.46□□□□□ -1.54
VCAN-207ENST00000507162 DHRS12A0PJE2 317 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 UNC119BA6NIH7 251 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 OR5B21A6NL26 309 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 BIRC5O15392 142 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 NOS1APO75052 506 aaPredicted RBP5.45□□□□□ -1.54
VCAN-207ENST00000507162 CDK2AP2O75956 126 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 IFNA14P01570 189 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 IFNA4P05014 189 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 LGALS1P09382 135 aaKnown RBP5.45□□□□□ -1.54
VCAN-207ENST00000507162 CD7P09564 240 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 CD34P28906 385 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 PPIFP30405 207 aaKnown RBP5.45□□□□□ -1.54
VCAN-207ENST00000507162 MAP2K3P46734 347 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 FXYD6P3P58550 94 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 ZNF45Q02386 682 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 TNFRSF9Q07011 255 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 MADCAM1Q13477 382 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 VMACQ2NL98 169 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 AGKQ53H12 422 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 SLX4IPQ5VYV7 408 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 PRSS45Q7RTY3 260 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 ANGPTL5Q86XS5 388 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 ZNF573Q86YE8 665 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 OR8H3Q8N146 312 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 OR2T10Q8NGZ9 312 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 OR9G1Q8NH87 305 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 ZNRF4Q8WWF5 429 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 LEAP2Q969E1 77 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 RSRC1Q96IZ7 334 aaKnown RBP5.45□□□□□ -1.54
VCAN-207ENST00000507162 S1PR3Q99500 378 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 IFT27Q9BW83 186 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 DGCR6LQ9BY27 220 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 TINAGL1Q9GZM7 467 aaPredicted RBP5.45□□□□□ -1.54
VCAN-207ENST00000507162 PLEKHA1Q9HB21 404 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 HES4Q9HCC6 221 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 PLSCR3Q9NRY6 295 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 FBXL17Q9UF56 701 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 TMEM5Q9Y2B1 443 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 POLDIP2Q9Y2S7 368 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 SNX13Q9Y5W8 968 aa5.45□□□□□ -1.54
VCAN-207ENST00000507162 FLG2Q5D862 2391 aaPredicted RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 J3QR06 171 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 DLGAP1O14490 977 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 FFAR1O14842 300 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 GSC2O15499 205 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 INAFM2P0DMQ5 153 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 SLC2A2P11168 524 aaPredicted RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 DUSP1P28562 367 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 NPBWR2P48146 333 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 REG1BP48304 166 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 RAB7AP51149 207 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 F2RL1P55085 397 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 RAB40BQ12829 278 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 EBI3Q14213 229 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 LRRC23Q53EV4 343 aaPredicted RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 CYBRD1Q53TN4 286 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 ASRGL1Q7L266 308 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 COMMD2Q86X83 199 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 OFCC1Q8IZS5 231 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 Q8N402 240 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 FAM86B1Q8N7N1 296 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 TSEN15Q8WW01 171 aaKnown RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 TMEM106AQ96A25 262 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 MNTQ99583 582 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 CGREF1Q99674 301 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 KAT8Q9H7Z6 458 aaKnown RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 SLC25A19Q9HC21 320 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 PARP11Q9NR21 331 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 GPR173Q9NS66 373 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 THAP1Q9NVV9 213 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 SLC2A8Q9NY64 477 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 ZNF107Q9UII5 783 aaPredicted RBP5.44□□□□□ -1.54
VCAN-207ENST00000507162 COPS3Q9UNS2 423 aa5.44□□□□□ -1.54
VCAN-207ENST00000507162 TRAV41A0A0B4J266 112 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 A0A1W2PPE3 182 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 FAM90A10PA6NDY2 464 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 IGLL5B9A064 214 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 F8VVB4 439 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 F8VWA3 439 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 MGST3O14880 152 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 HAND1O96004 215 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 NRASP01111 189 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 H2BFMP0C1H6 154 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 FMO3P31513 532 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 SLC6A6P31641 620 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 PTGFRP43088 359 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 GLIPR1P48060 266 aa5.43□□□□□ -1.54
VCAN-207ENST00000507162 GNG10P50151 68 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms