RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SMN1Q16637 294 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ZSCAN26Q16670 478 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 KLHL22Q53GT1 634 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ASPHD2Q6ICH7 369 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF529Q6P280 563 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 LHFPL4Q7Z7J7 247 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 DYNAPQ8N1N2 210 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 OR4S1Q8NGB4 309 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 HAVCR2Q8TDQ0 301 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 RGP1Q92546 391 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 RFT1Q96AA3 541 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF714Q96N38 554 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 SPACA5Q96QH8 159 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 PDCD1LG2Q9BQ51 273 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 PPA2Q9H2U2 334 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 RHOFQ9HBH0 211 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 SMPD3Q9NY59 655 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 FBLN5Q9UBX5 448 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 TBL2Q9Y4P3 447 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 NOTCH1P46531 2555 aa7.35□□□□□ -1.23
PDLIM5-209ENST00000506632 hADV38S2A0JD32 116 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 MEX3AA1L020 520 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 MGST3O14880 152 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 SULT1B1O43704 296 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 BAG2O95816 211 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 OR2H2O95918 312 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 CALCBP10092 127 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 GABRR1P24046 479 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 DCKP27707 260 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 P2RX3P56373 397 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 LGALS4P56470 323 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 EDDM3AQ14507 147 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 CCDC58Q4VC31 144 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 ZNF691Q5VV52 312 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 XAF1Q6GPH4 301 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 SLC35E4Q6ICL7 350 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 Q6P435 159 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 SERPINA12Q8IW75 414 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 TPRX1Q8N7U7 411 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 OR5D18Q8NGL1 313 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 OR5D14Q8NGL3 314 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 OR13D1Q8NGV5 346 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 OR5AK2Q8NH90 309 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 PPP1R35Q8TAP8 253 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 FOXRED1Q96CU9 486 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 CHST6Q9GZX3 395 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 NEK6Q9HC98 313 aa7.34□□□□□ -1.23
PDLIM5-209ENST00000506632 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 SIRPB1O00241 398 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 SH2D1BO14796 132 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 WIPF1O43516 503 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CHST1O43916 411 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 MMP23AO75900 390 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CLIC3O95833 236 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 ARG1P05089 322 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CSN2P05814 226 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 KIR2DS4P43632 304 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 ETV1P50549 477 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 DYNLT3P51808 116 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 GTF2A1P52655 376 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 EFNB2P52799 333 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 GBX2P52951 348 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 SNU13P55769 128 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 ADARB1P78563 741 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CDK5R1Q15078 307 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 KISS1Q15726 138 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 LY6EQ16553 131 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 ELP2Q6IA86 826 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 PACRGLQ8N7B6 248 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CHST4Q8NCG5 386 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF555Q8NEP9 628 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 PXT1Q8NFP0 134 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CNIH3Q8TBE1 160 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CORO2AQ92828 525 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 MALSU1Q96EH3 234 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 CDCA4Q9BXL8 241 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 RANBP3Q9H6Z4 567 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 RAB18Q9NP72 206 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 EXOSC4Q9NPD3 245 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 C8orf4Q9NR00 106 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 GLS2Q9UI32 602 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 DHDHQ9UQ10 334 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 GSTK1Q9Y2Q3 226 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 UBE2J1Q9Y385 318 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 SESN1Q9Y6P5 492 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 KIAA2026Q5HYC2 2103 aa7.33□□□□□ -1.24
PDLIM5-209ENST00000506632 IGHV2-26A0A0B4J1V2 119 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 A0A0G2JK05 382 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 M0QZ24 198 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 SLC33A1O00400 549 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 TIMM23O14925 209 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 OGG1O15527 345 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 HCKP08631 526 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 OCM2P0CE71 109 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 OCMP0CE72 109 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 CD34P28906 385 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 GABRA5P31644 462 aa7.32□□□□□ -1.24
PDLIM5-209ENST00000506632 GLIPR1P48060 266 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms