RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 EDDM3BP56851 147 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 MEF2CQ06413 473 aaPredicted RBP13.72□□□□□ -0.21
SNCA-209ENST00000506244 IL13RA2Q14627 380 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 TRAM1Q15629 374 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 GRK1Q15835 563 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 TUSC1Q2TAM9 212 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 ZNF367Q7RTV3 350 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 RNF144BQ7Z419 303 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 CDH26Q8IXH8 852 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 TMED9Q9BVK6 235 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 METTL9Q9H1A3 318 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 SIRT7Q9NRC8 400 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 IL36GQ9NZH8 169 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 TRAV8-7A0A075B6U6 113 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 SIRPB1O00241 398 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 MGST3O14880 152 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 VENTXO95231 258 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 OR2H2O95918 312 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 CSTBP04080 98 aaKnown RBP13.71□□□□□ -0.21
SNCA-209ENST00000506244 PRTN3P24158 256 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 DUSP1P28562 367 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 OR3A4PP47883 348 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 GPR176Q14439 515 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 C17orf107Q6ZR85 190 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 SVOPQ8N4V2 548 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 JAGN1Q8N5M9 183 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 ORAI1Q96D31 301 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 YTHDF1Q9BYJ9 559 aaKnown RBP13.71□□□□□ -0.21
SNCA-209ENST00000506244 TCF7L1Q9HCS4 588 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 NOX4Q9NPH5 578 aa13.71□□□□□ -0.21
SNCA-209ENST00000506244 A0A1W2PPK0 400 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 TMEM82A0PJX8 343 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 MEGF11A6BM72 1044 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 RBP4P02753 201 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 CALCBP10092 127 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 LMO1P25800 156 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 TPBGQ13641 420 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 KRTAP24-1Q3LI83 254 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 TMEM200BQ69YZ2 307 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 ASCL4Q6XD76 172 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 LINC00596Q86U02 117 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 BCL6BQ8N143 479 aaPredicted RBP13.7□□□□□ -0.22
SNCA-209ENST00000506244 Q8N7P7 452 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 OR4M1Q8NGD0 313 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 PHYHIPQ92561 330 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 MGLLQ99685 303 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 MDFIQ99750 246 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 CHST6Q9GZX3 395 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 SLITRK2Q9H156 845 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 LINC00312Q9Y6C7 94 aa13.7□□□□□ -0.22
SNCA-209ENST00000506244 DEGS1O15121 323 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 PSPNO60542 156 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 HTR3BO95264 441 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 MAS1P04201 325 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 CSN2P05814 226 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 CPEP16870 476 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
SNCA-209ENST00000506244 OR3A1P47881 315 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 P2RX3P56373 397 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 ERVFRD-1P60508 538 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 BAMBIQ13145 260 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 NHLRC3Q5JS37 347 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 Q8NFD4 153 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 ZDHHC16Q969W1 377 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 ZNF714Q96N38 554 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 UQCC2Q9BRT2 126 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 ING4Q9UNL4 249 aa13.69□□□□□ -0.22
SNCA-209ENST00000506244 MAGEA13PA6NCF6 341 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 PIN1P1O15428 100 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 SC5DO75845 299 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 CDRT1O95170 752 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 MAP2K4P45985 399 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 UBE2E1P51965 193 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 SCN1BQ07699 218 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 ZNF273Q14593 569 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 HSD17B12Q53GQ0 312 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 AWAT2Q6E213 333 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 UNQ9370/PRO34162Q6UXP9 181 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 CEACAM19Q7Z692 300 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 OSR2Q8N2R0 312 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 OR4S1Q8NGB4 309 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 OR10K1Q8NGX5 313 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 FOXRED1Q96CU9 486 aaPredicted RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 ZNF48Q96MX3 618 aaPredicted RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 PPA2Q9H2U2 334 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 HEXA-AS1Q9H8Q6 139 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms