RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TRMT10AQ8TBZ6 339 aaKnown RBP8.53□□□□□ -1.04
NR1I3-222ENST00000506018 PP6455Q8WZ26 134 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 TNFRSF14Q92956 283 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 BORCS8Q96FH0 119 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 OR5M11Q96RB7 305 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 NRIP2Q9BQI9 281 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 ELL3Q9HB65 397 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-222ENST00000506018 NEK6Q9HC98 313 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 RAB18Q9NP72 206 aa8.53□□□□□ -1.04
NR1I3-222ENST00000506018 LSM2Q9Y333 95 aaKnown RBP8.53□□□□□ -1.04
NR1I3-222ENST00000506018 A6NIN4 97 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 OGG1O15527 345 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 INMTO95050 263 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 TFF1P04155 84 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 TK1P04183 234 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CHRM2P08172 466 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CELP19835 753 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ALDH3B2P48448 385 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 RELBQ01201 579 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ALKBH1Q13686 389 aaKnown RBP8.52□□□□□ -1.05
NR1I3-222ENST00000506018 TMEM244Q5VVB8 128 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CD177Q8N6Q3 437 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ASCC1Q8N9N2 400 aaKnown RBP8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ZSCAN4Q8NAM6 433 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF485Q8NCK3 441 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 OR5AK2Q8NH90 309 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
NR1I3-222ENST00000506018 SMIM19Q96E16 107 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CEP19Q96LK0 163 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF488Q96MN9 340 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 CHST5Q9GZS9 411 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 HES4Q9HCC6 221 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 GLS2Q9UI32 602 aa8.52□□□□□ -1.05
NR1I3-222ENST00000506018 SMIM31A0A1B0GVY4 71 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 LOC107986453A0A1B0GWG9 222 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 CD36P16671 472 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF20P17024 532 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 GALP22466 123 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 PRKACBP22694 351 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 GABRA5P31644 462 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 RBP2P50120 134 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 ATP1B3P54709 279 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 CDK5R1Q15078 307 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 TAF9Q16594 264 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 AANATQ16613 207 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 LRRC75BQ2VPJ9 315 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 YIF1BQ5BJH7 314 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 LIPKQ5VXJ0 399 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 C11orf88Q6PI97 169 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 ANGPTL5Q86XS5 388 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 MKXQ8IYA7 352 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF676Q8N7Q3 588 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 DNAAF1Q8NEP3 725 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 OR13F1Q8NGS4 319 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 OR2G2Q8NGZ5 317 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 SSX3Q99909 188 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 CITED1Q99966 193 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 C16orf95Q9H693 158 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 C19orf12Q9NSK7 152 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 GSTK1Q9Y2Q3 226 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 ZNF281Q9Y2X9 895 aa8.51□□□□□ -1.05
NR1I3-222ENST00000506018 H3BSH0 61 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 H3BUI4 141 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 H3BUX3 64 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 K7N7A8 449 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 TSPAN9O75954 239 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 CLPXO76031 633 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 ISG15P05161 165 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 CD2P06729 351 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 MAPK3P27361 379 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 CEBPDP49716 269 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 GP2P55259 537 aaKnown RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 DLX1P56177 255 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 EDDM3BP56851 147 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 COL10A1Q03692 680 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 PRB3Q04118 309 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 UBE2V2Q15819 145 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 DMKNQ6E0U4 476 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 Q6ZSV7 163 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 LHFPL2Q6ZUX7 228 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 OR4M1Q8NGD0 313 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 OR13D1Q8NGV5 346 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 PPP1R35Q8TAP8 253 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 PHYHIPQ92561 330 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 GHSRQ92847 366 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
NR1I3-222ENST00000506018 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 OPALINQ96PE5 141 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 BCL7BQ9BQE9 202 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 PPA2Q9H2U2 334 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 NDUFB11Q9NX14 153 aa8.5□□□□□ -1.05
NR1I3-222ENST00000506018 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms