RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 YIF1BQ5BJH7 314 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 CT45A1Q5HYN5 189 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 C12orf54Q6X4T0 127 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 IDO2Q6ZQW0 420 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 PLCZ1Q86YW0 608 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 MKXQ8IYA7 352 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 HS3ST5Q8IZT8 346 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 NPWQ8N729 165 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.99□□□□□ -1.77
CHD1-204ENST00000505982 MDS2Q8NDY4 140 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 OR56A4Q8NGH8 313 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 OR5H6Q8NGV6 325 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 CT45A3Q8NHU0 189 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 ENKURQ8TC29 256 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 RNF138Q8WVD3 245 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 APH1BQ8WW43 257 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 TMEM230Q96A57 120 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 NTAN1Q96AB6 310 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 KIAA1143Q96AT1 154 aaPredicted RBP3.99□□□□□ -1.77
CHD1-204ENST00000505982 CREB3L1Q96BA8 519 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 COPS4Q9BT78 406 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 MED10Q9BTT4 135 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 BBS2Q9BXC9 721 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 GABARAPL1Q9H0R8 117 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 TMEM38AQ9H6F2 299 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 POPDC3Q9HBV1 291 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 ZNF331Q9NQX6 463 aaPredicted RBP3.99□□□□□ -1.77
CHD1-204ENST00000505982 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 TREX1Q9NSU2 369 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 FBXL12Q9NXK8 326 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 POLR3HQ9Y535 204 aaPredicted RBP3.99□□□□□ -1.77
CHD1-204ENST00000505982 ANKRD12Q6UB98 2062 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 GREB1Q4ZG55 1949 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 NUP205Q92621 2012 aa3.99□□□□□ -1.77
CHD1-204ENST00000505982 TRPM7Q96QT4 1865 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 NRCAMQ92823 1304 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 IGKV6D-21A0A0A0MT36 114 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ARPC4-TTLL3A0A0A6YYG9 625 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 PLAC8L1A1L4L8 177 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 POLR1CO15160 346 aaPredicted RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 RGS5O15539 181 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ZNF682O95780 498 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 SERPINA1P01009 418 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 HBE1P02100 147 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 RETP07949 1114 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 MYL9P24844 172 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 HOXA9P31269 272 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 CA5AP35218 305 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 TGFBR1P36897 503 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 CEACAM3P40198 252 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ETV6P41212 452 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 OR1G1P47890 313 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 CRISP3P54108 245 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 CDKN2DP55273 166 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 FOXA1P55317 472 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ZNF33AQ06730 810 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 MAD2L1BPQ15013 274 aaPredicted RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 POU2AF1Q16633 256 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 LRRC26Q2I0M4 334 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 TPTE2P1Q5T6R2 138 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 FKBP1CQ5VVH2 108 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 LAIR2Q6ISS4 152 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 LYPD2Q6UXB3 125 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 CYHR1Q6ZMK1 362 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 MRPL55Q7Z7F7 128 aaKnown RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 SLC51BQ86UW2 128 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ZNF547Q8IVP9 402 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 STPG2Q8N412 459 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 STX19Q8N4C7 294 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 LRRC52Q8N7C0 313 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 FAM86B1Q8N7N1 296 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 ZFAND1Q8TCF1 268 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 SLC7A6Q92536 515 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 Q96MT0 163 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 KCNS3Q9BQ31 491 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 SLC25A2Q9BXI2 301 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 NXF2Q9GZY0 626 aaKnown RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 MFSD1Q9H3U5 465 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 RGCCQ9H4X1 137 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 DUSP21Q9H596 190 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 REEP1Q9H902 201 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 C12orf4Q9NQ89 552 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 HEBP1Q9NRV9 189 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 DDIT4Q9NX09 232 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 PRG3Q9Y2Y8 225 aaPredicted RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 SAMHD1Q9Y3Z3 626 aaKnown RBP3.98□□□□□ -1.77
CHD1-204ENST00000505982 KCNE3Q9Y6H6 103 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 MCM3APO60318 1980 aa3.98□□□□□ -1.77
CHD1-204ENST00000505982 IGLV11-55A0A075B6I3 123 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 IGHV3-64DA0A0J9YX35 117 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 LINC00854A0A1B0GVQ3 168 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 A0A1W2PRD5 423 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 WI2-2373I1.2A0A1W2PRP0 233 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 EFCAB10A6NFE3 127 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 OR6C70A6NIJ9 312 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 HLA-DQB2P05538 268 aa3.97□□□□□ -1.77
CHD1-204ENST00000505982 EIF4EP06730 217 aaKnown RBP3.97□□□□□ -1.77
CHD1-204ENST00000505982 RPS17P08708 135 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms