RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TRIB3Q96RU7 358 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 STACQ99469 402 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 VAT1Q99536 393 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 ZNF436Q9C0F3 470 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 PRORYQ9H606 182 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 WDR55Q9H6Y2 383 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 RHOFQ9HBH0 211 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 ACOT13Q9NPJ3 140 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 SDHAF2Q9NX18 166 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 ITGB4P16144 1822 aa1.67□□□□□ -2.14
TOPBP1-204ENST00000505804 A0A0J9YYE9 177 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 MYBPHLA2RUH7 354 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 PRMT5O14744 637 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 FFAR1O14842 300 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 ENSAO43768 121 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 OTCP00480 354 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 TRBC1P01850 177 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 XKP51811 444 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 ATP5J2P56134 94 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 DHRS2Q13268 280 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 STK38Q15208 465 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 Q499Y3 187 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 ACTBL2Q562R1 376 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 DPPA2Q7Z7J5 298 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 GALNT10Q86SR1 603 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 CYP4Z1Q86W10 505 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 ASCC1Q8N9N2 400 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 BPIFB6Q8NFQ5 453 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 CLHC1Q8NHS4 586 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 BLNKQ8WV28 456 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 CACNG8Q8WXS5 425 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 APOBEC3DQ96AK3 386 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 TM6SF2Q9BZW4 377 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 POMKQ9H5K3 350 aa1.66□□□□□ -2.14
TOPBP1-204ENST00000505804 A0A1W2PNM2 257 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 RBFOX3A6NFN3 312 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 H3BMM0 161 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 PSCAO43653 123 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 DEDDO75618 318 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 CTSGP08311 255 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 SCGB1C2P0DMR2 95 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 GZMAP12544 262 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 CPN2P22792 545 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 CRABP2P29373 138 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 IL12BP29460 328 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 DEKP35659 375 aaKnown RBP1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 HNRNPA1L2Q32P51 320 aaKnown RBP1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 GLYATQ6IB77 296 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 ERICH5Q6P6B1 374 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 LYPD6Q86Y78 171 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 OR2M3Q8NG83 312 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 OR51Q1Q8NH59 317 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 SCGB1C1Q8TD33 95 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 MAL2Q969L2 176 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 UBE2WQ96B02 151 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF396Q96N95 335 aaPredicted RBP1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 ANAPC13Q9BS18 74 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 ULBP1Q9BZM6 244 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 SYT4Q9H2B2 425 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 PLEKHA1Q9HB21 404 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 VAPAQ9P0L0 249 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 C14orf166Q9Y224 244 aaKnown RBP1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 SLC22A14Q9Y267 594 aa1.65□□□□□ -2.15
TOPBP1-204ENST00000505804 TNIKQ9UKE5 1360 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 CD300LBA8K4G0 201 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 H0YC42 278 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 ZNF73O43830 326 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 SC5DO75845 299 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 CDS2O95674 445 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 CD8AP01732 235 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 HLA-AP01891 365 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 GTF2F2P13984 249 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 PTNP21246 168 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 FUSP35637 526 aaKnown RBP eCLIP1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 PSMD8P48556 350 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 STX4Q12846 297 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 TPBGQ13641 420 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 GUSBP1Q15486 140 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 TMEM215Q68D42 235 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 SLC25A25Q6KCM7 469 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 TPGS1Q6ZTW0 290 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 PID1Q7Z2X4 250 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 FAM19A1Q7Z5A9 133 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 MARCH3Q86UD3 253 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 Q8NAQ8 132 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 OR13C9Q8NGT0 318 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 OR6K2Q8NGY2 324 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 DOK4Q8TEW6 326 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 TWIST2Q8WVJ9 160 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 CCL17Q92583 94 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 HIGD2AQ9BW72 106 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 NXF2Q9GZY0 626 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 VCX3AQ9NNX9 186 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 NRCAMQ92823 1304 aa1.64□□□□□ -2.15
TOPBP1-204ENST00000505804 BRD4O60885 1362 aaPredicted RBP1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 IGKV1D-37A0A075B6S9 117 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 A0A1B0GU33 70 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 A0A1B0GXF2 115 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 A6NED7 52 aa1.63□□□□□ -2.15
TOPBP1-204ENST00000505804 SLC31A1O15431 190 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms