RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TREM2Q9NZC2 230 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 KANTRA0A1W2PQU2 76 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 MSTNO14793 375 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 KLK10O43240 276 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 OPRM1P35372 400 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 MDH2P40926 338 aaKnown RBP14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 C3orf36Q3SXR2 165 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 FAM58AQ8N1B3 248 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 C2orf50Q96LR7 162 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 SUCNR1Q9BXA5 334 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 RTTNQ86VV8 2226 aa14.78□□□□□ -0.04
TRAPPC11-204ENST00000505676 PIGBOS1A0A0B4J2F0 54 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 A0A1B0GW55 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 CCSO14618 274 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L2P0CJ85 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L3P0CJ86 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L4P0CJ87 422 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L5P0CJ88 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L6P0CJ89 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4L7P0CJ90 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 HERV-K104P61576 105 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DAZAP2Q15038 168 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 SLC9A3R2Q15599 337 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 ABCA11PQ4W5N1 156 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 SPERTQ8NA61 448 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 NAXEQ8NCW5 288 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 Q9N2K0 584 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 DUX4Q9UBX2 424 aa14.77□□□□□ -0.04
TRAPPC11-204ENST00000505676 MKRN2OSH3BPM6 223 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 DIRAS3O95661 229 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 CGAP01215 116 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 IFNA21P01568 189 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 LYL1P12980 280 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 BAMBIQ13145 260 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 ESCO2Q56NI9 601 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 SHEQ5VZ18 495 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 ZNF585AQ6P3V2 769 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 WDR31Q8NA23 367 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 MARVELD3Q96A59 401 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 PHYHIPLQ96FC7 376 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 MED9Q9NWA0 146 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 CRIM1Q9NZV1 1036 aa14.77□□□□□ -0.05
TRAPPC11-204ENST00000505676 TEX13DA0A0J9YY54 714 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 RPS10-NUDT3A0A1W2PQS6 291 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 BCL2L11O43521 198 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 TNFSF13O75888 250 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 IGLV1-44P01699 117 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 PRKACAP17612 351 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 CA6P23280 308 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 IL32P24001 234 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 SRPXP78539 464 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 MZT1Q08AG7 82 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 ANKRD55Q3KP44 614 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 VWA1Q6PCB0 445 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 FIP1L1Q6UN15 594 aaKnown RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 MOB1BQ7L9L4 216 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 BHLHE23Q8NDY6 225 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 OR1J1Q8NGS3 322 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 SEC22AQ96IW7 307 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 METTL8Q9H825 291 aaKnown RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 DKK4Q9UBT3 224 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 MED12LQ86YW9 2145 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 C13orf42A0A1B0GVH6 325 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 EEF1E1-BLOC1S5C9J1V9 151 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 KNG1P01042 644 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 TK1P04183 234 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 FCGR2CP31995 323 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 TIMP3P35625 211 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 NUP62P37198 522 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 LRTM2Q8N967 370 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 SLC25A40Q8TBP6 338 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 OR2J1Q9GZK6 312 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 NAA60Q9H7X0 242 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 ZNF71Q9NQZ8 489 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 ZFP57Q9NU63 452 aa14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 ZNF629Q9UEG4 869 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC11-204ENST00000505676 SYNGR1O43759 233 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 SLC34A2O95436 690 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 BHLHA15Q7RTS1 189 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 STARD4Q96DR4 205 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 ADAT1Q9BUB4 502 aaKnown RBP14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 RSRP1Q9BUV0 290 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 WDR13Q9H1Z4 485 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 ZNF581Q9P0T4 197 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 DNAJB11Q9UBS4 358 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 ATP23Q9Y6H3 246 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 CACNA1GO43497 2377 aa14.75□□□□□ -0.05
TRAPPC11-204ENST00000505676 TRDCB7Z8K6 153 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 CFDP00746 253 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 CELA3BP08861 270 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 PI3P19957 117 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 KITLGP21583 273 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 PIGPP57054 158 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 SPIN3Q5JUX0 258 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 C1orf185Q5T7R7 199 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 PRSS54Q6PEW0 395 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 OR5H1A6NKK0 313 aa14.74□□□□□ -0.05
TRAPPC11-204ENST00000505676 RND3P61587 244 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms