RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	SIRPB1	O00241	398 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	BCL3	P20749	454 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	DUSP1	P28562	367 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	ZNF91	Q05481	1191 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	HABP2	Q14520	560 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	ZNF146	Q15072	292 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	KHDC1L	Q5JSQ8	128 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	SAMD5	Q5TGI4	173 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	SSX6	Q7RTT6	188 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	CHST4	Q8NCG5	386 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	OR5AU1	Q8NGC0	362 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	LIN7B	Q9HAP6	207 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	PCDHB16	Q9NRJ7	776 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	RBFOX1	Q9NWB1	397 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	TAS2R3	Q9NYW6	316 aa		13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	TET2	Q6N021	2002 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-256	ENST00000505066	TCRBV4S1A1T	A0A5B7	111 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	TMEM82	A0PJX8	343 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	ALX3	O95076	343 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	IGHA1	P01876	353 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	HCK	P08631	526 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	EPHA2	P29317	976 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	PTGFR	P43088	359 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	LOXL3	P58215	753 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	PDZK1IP1	Q13113	114 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	TPRX1	Q8N7U7	411 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	ZNF565	Q8N9K5	539 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	OR5D14	Q8NGL3	314 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	OR2G2	Q8NGZ5	317 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	EME1	Q96AY2	570 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	RNFT2	Q96EX2	444 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	CITED2	Q99967	270 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	GABARAPL3	Q9BY60	117 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	COMMD4	Q9H0A8	199 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	HMG20A	Q9NP66	347 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	SERTAD4	Q9NUC0	356 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	OR6C3	Q9NZP0	311 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	OAZ3	Q9UMX2	235 aa		13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-256	ENST00000505066	IGKV1-27	A0A075B6S5	117 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066		A0A1W2PRX2	142 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	SAC3D1	A6NKF1	404 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066		F8VVB4	439 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066		F8VWA3	439 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	DEGS1	O15121	323 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	SLC16A6	O15403	523 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	ENTPD6	O75354	484 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	ISG15	P05161	165 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	FAM106CP	P0CH98	169 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	TMEM225B	P0DP42	221 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	DBT	P11182	482 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	CDK2	P24941	298 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	RBM39	Q14498	530 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	KPRP	Q5T749	579 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	RDH10	Q8IZV5	341 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	DYNAP	Q8N1N2	210 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	PRSS35	Q8N3Z0	413 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	ACBD7	Q8N6N7	88 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	DPF1	Q92782	380 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066		Q96MT0	163 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	GPR61	Q9BZJ8	451 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	MMP28	Q9H239	520 aa		13.18	□□□□□ -0.3
DDR1-256	ENST00000505066	VWF	P04275	2813 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	OOSP1	A8MZH6	123 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066		J3QLW9	94 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	OR2H2	O95918	312 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	ZNF19	P17023	458 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	NPBWR2	P48146	333 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	CCR9	P51686	369 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	SLC35A2	P78381	396 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	BDH1	Q02338	343 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	MRPL28	Q13084	256 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	C9orf152	Q5JTZ5	239 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	KRBOX4	Q5JUW0	171 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	PRAMEF5	Q5TYX0	476 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	HEPN1	Q6WQI6	88 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	SAXO1	Q8IYX7	474 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	OR52N4	Q8NGI2	321 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	OR13C9	Q8NGT0	318 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	HAVCR2	Q8TDQ0	301 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	ADAT3	Q96EY9	351 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	HRASLS5	Q96KN8	279 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	GPER1	Q99527	375 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	ZCCHC4	Q9H5U6	513 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	ING3	Q9NXR8	418 aa		13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-256	ENST00000505066	MPZL2	O60487	215 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	PSPN	O60542	156 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	DUS4L	O95620	317 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	CALCB	P10092	127 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	C21orf33	P30042	268 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	KIR3DL2	P43630	455 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	OR3A1	P47881	315 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	BLCAP	P62952	87 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	AES	Q08117	197 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	OXLD1	Q5BKU9	147 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	SERPINA12	Q8IW75	414 aa		13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	TSEN15	Q8WW01	171 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-256	ENST00000505066	RFT1	Q96AA3	541 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms