RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SNRPAP09012 282 aaKnown RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 RBP1P09455 135 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RHOXF2BP0C7M4 288 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 SMIM10L1P0DMW3 83 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 IGHV3-43DP0DP04 118 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 GFAPP14136 432 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 TAC1P20366 129 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 KITLGP21583 273 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 SSR2P43308 183 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RAP1GDS1P52306 607 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ZNF136P52737 540 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 UGT2B15P54855 530 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RAB38P57729 211 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 FBXW4P57775 412 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RAB8AP61006 207 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ACTA2P62736 377 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ACTG2P63267 376 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ACTC1P68032 377 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 BTN3A2P78410 334 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ARG2P78540 354 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 HMGCS1Q01581 520 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 IRF8Q02556 426 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ZNF92Q03936 586 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 TGM3Q08188 693 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ECH1Q13011 328 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 DOC2AQ14183 400 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 EBI3Q14213 229 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 C18orf21Q32NC0 220 aaPredicted RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 DEFB134Q4QY38 66 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 FBXO48Q5FWF7 155 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 KHDRBS2Q5VWX1 349 aaKnown RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 MED27Q6P2C8 311 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 Q6ZS92 163 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 NCCRP1Q6ZVX7 275 aaPredicted RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 NDUFAF7Q7L592 441 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 OAFQ86UD1 273 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 SLC22A9Q8IVM8 553 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 CA13Q8N1Q1 262 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ST6GALNAC3Q8NDV1 305 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 PLPP5Q8NEB5 264 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 OR9K2Q8NGE7 335 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 OR5T3Q8NGG3 340 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ACMSDQ8TDX5 336 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 DCAKDQ8WVC6 231 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.01□□□□□ -2.09
RFC1-209ENST00000504974 TSLPQ969D9 159 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 C8orf44Q96CB5 159 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 TUBGCP3Q96CW5 907 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 MS4A6EQ96DS6 147 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 SMIM10Q96HG1 83 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 CNDP1Q96KN2 507 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 FOXC2Q99958 501 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 MRPL57Q9BQC6 102 aaKnown RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 RHOXF2Q9BQY4 288 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 CCDC77Q9BR77 488 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 MS4A8Q9BY19 250 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 AICDAQ9GZX7 198 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 ILKAPQ9H0C8 392 aaPredicted RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 IFI27L2Q9H2X8 130 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RPF2Q9H7B2 306 aaKnown RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 LYRM4Q9HD34 91 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 PSMC3IPQ9P2W1 217 aaPredicted RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 PCTPQ9UKL6 214 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 STK38LQ9Y2H1 464 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 MMACHCQ9Y4U1 282 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 DYSFO75923 2080 aa2.01□□□□□ -2.09
RFC1-209ENST00000504974 RAI1Q7Z5J4 1906 aaPredicted RBP2.01□□□□□ -2.09
RFC1-209ENST00000504974 ALPK2Q86TB3 2170 aa2□□□□□ -2.09
RFC1-209ENST00000504974 EXPH5Q8NEV8 1989 aa2□□□□□ -2.09
RFC1-209ENST00000504974 A0A0A6YYD5 115 aa2□□□□□ -2.09
RFC1-209ENST00000504974 TRAV17A0A0B4J275 112 aa2□□□□□ -2.09
RFC1-209ENST00000504974 A0A1W2PPE3 182 aa2□□□□□ -2.09
RFC1-209ENST00000504974 ZNF726A6NNF4 738 aa2□□□□□ -2.09
RFC1-209ENST00000504974 GABRR3A8MPY1 467 aa2□□□□□ -2.09
RFC1-209ENST00000504974 A8MT66 165 aa2□□□□□ -2.09
RFC1-209ENST00000504974 H0YIV9 168 aa2□□□□□ -2.09
RFC1-209ENST00000504974 H3BQF6 201 aa2□□□□□ -2.09
RFC1-209ENST00000504974 PLPP1O14494 284 aa2□□□□□ -2.09
RFC1-209ENST00000504974 ANGPTL7O43827 346 aa2□□□□□ -2.09
RFC1-209ENST00000504974 CDH16O75309 829 aa2□□□□□ -2.09
RFC1-209ENST00000504974 EIF3GO75821 320 aaKnown RBP eCLIP2□□□□□ -2.09
RFC1-209ENST00000504974 MYO1DO94832 1006 aa2□□□□□ -2.09
RFC1-209ENST00000504974 SEMA3DO95025 777 aa2□□□□□ -2.09
RFC1-209ENST00000504974 OTCP00480 354 aa2□□□□□ -2.09
RFC1-209ENST00000504974 IGLV2-23P01705 113 aa2□□□□□ -2.09
RFC1-209ENST00000504974 SHBGP04278 402 aa2□□□□□ -2.09
RFC1-209ENST00000504974 FABP3P05413 133 aa2□□□□□ -2.09
RFC1-209ENST00000504974 PRPS2P11908 318 aa2□□□□□ -2.09
RFC1-209ENST00000504974 HIST1H1TP22492 207 aaPredicted RBP2□□□□□ -2.09
RFC1-209ENST00000504974 CPN2P22792 545 aa2□□□□□ -2.09
RFC1-209ENST00000504974 VHLP40337 213 aa2□□□□□ -2.09
RFC1-209ENST00000504974 CYB561P49447 251 aa2□□□□□ -2.09
RFC1-209ENST00000504974 CCNG1P51959 295 aa2□□□□□ -2.09
RFC1-209ENST00000504974 OR4D2P58180 307 aa2□□□□□ -2.09
RFC1-209ENST00000504974 PLP1P60201 277 aa2□□□□□ -2.09
RFC1-209ENST00000504974 NAA20P61599 178 aa2□□□□□ -2.09
RFC1-209ENST00000504974 NUTF2P61970 127 aaKnown RBP2□□□□□ -2.09
RFC1-209ENST00000504974 IFT88Q13099 833 aa2□□□□□ -2.09
RFC1-209ENST00000504974 SLAQ13239 276 aa2□□□□□ -2.09
RFC1-209ENST00000504974 SSX2Q16385 188 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms