RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SLC17A7Q9P2U7 560 aa3.71□□□□□ -1.82
NIPBL-203ENST00000503274 WARS2Q9UGM6 360 aaKnown RBP3.71□□□□□ -1.82
NIPBL-203ENST00000503274 BTNL2Q9UIR0 455 aa3.71□□□□□ -1.82
NIPBL-203ENST00000503274 TRAPPC4Q9Y296 219 aa3.71□□□□□ -1.82
NIPBL-203ENST00000503274 GSTK1Q9Y2Q3 226 aa3.71□□□□□ -1.82
NIPBL-203ENST00000503274 NOSIPQ9Y314 301 aaKnown RBP3.71□□□□□ -1.82
NIPBL-203ENST00000503274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.7□□□□□ -1.822e-7■■■■■ 27.8
NIPBL-203ENST00000503274 IGHV3-15A0A0B4J1V0 119 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 IGHV2-70DA0A0C4DH43 119 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 OR5H1A6NKK0 313 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TRPC5OSA6NMA1 111 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 C9JVG2 144 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF208O43345 1280 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 FCMRO60667 390 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CA11O75493 328 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 LYZL6O75951 148 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 KRT75O95678 551 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 DBIP07108 87 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CSF3P09919 207 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 OR12D1P0DN82 309 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 COX5AP20674 150 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CXCR1P25024 350 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 IDH2P48735 452 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 FABP6P51161 128 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 POLR2HP52434 150 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 OR2B6P58173 313 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 SLC35A1P78382 337 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 EWSR1Q01844 656 aaKnown RBP eCLIP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 BSPH1Q075Z2 132 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 STX3Q13277 289 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 SKP2Q13309 424 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TOMM34Q15785 309 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM41BQ5BJD5 291 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 HHATQ5VTY9 493 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 AP1ARQ63HQ0 302 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 OR4F3Q6IEY1 312 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CLEC2AQ6UVW9 174 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF621Q6ZSS3 439 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 Q8N9L7 120 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 RAB3IL1Q8TBN0 382 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TESCQ96BS2 214 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 NEURL3Q96EH8 262 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 PPP1R36Q96LQ0 422 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TRNT1Q96Q11 434 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 PANX1Q96RD7 426 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 GPA33Q99795 319 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 PAIP2Q9BPZ3 127 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 KCNS3Q9BQ31 491 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 SLC35A5Q9BS91 424 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM109Q9BVC6 243 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 OR51I1Q9H343 314 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CENPHQ9H3R5 247 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 COQ10BQ9H8M1 238 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 THUMPD1Q9NXG2 353 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CALML5Q9NZT1 146 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 MARCOQ9UEW3 520 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 CHRNA9Q9UGM1 479 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 KCNE3Q9Y6H6 103 aa3.7□□□□□ -1.82
NIPBL-203ENST00000503274 ANK3Q12955 4377 aaKnown RBP3.7□□□□□ -1.82
NIPBL-203ENST00000503274 A0A096LPI6 279 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 TMED7-TICAM2A0A0A6YYA0 188 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 PSMB11A5LHX3 300 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 DPRXA6NFQ7 191 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 E9PBE3 544 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 FAAHO00519 579 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 RFXANKO14593 260 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 SCN2BO60939 215 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 VAMP5O95183 116 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 H6PDO95479 791 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 IL6P05231 212 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 ERCC1P07992 297 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-203ENST00000503274 SOD3P08294 240 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 PSG2P11465 335 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 SLC25A16P16260 332 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 NCF2P19878 526 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF83P51522 516 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CRISP3P54108 245 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 PRPS1P60891 318 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 VSNL1P62760 191 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CASP8Q14790 479 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 TSC22D1Q15714 1073 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 NDUFAF6Q330K2 333 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CHRFAM7AQ494W8 412 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 SAXO2Q658L1 398 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM225Q6GV28 225 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 TNFAIP8L2Q6P589 184 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CASP12Q6UXS9 341 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 LRRC74BQ6ZQY2 392 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CLECL1Q8IZS7 167 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 MUC15Q8N387 334 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 SVOPLQ8N434 492 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 C17orf78Q8N4C9 275 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 MREGQ8N565 214 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF433Q8N7K0 673 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF540Q8NDQ6 660 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 OR51G2Q8NGK0 314 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 RAB8BQ92930 207 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 FAM104AQ969W3 186 aa3.69□□□□□ -1.82
NIPBL-203ENST00000503274 CCDC115Q96NT0 180 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms