RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF146Q15072 292 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 MEDAGQ5VYS4 303 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 Q6ZS46 218 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 ENTHD1Q8IYW4 607 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 OR13C3Q8NGS6 347 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 OR13C9Q8NGT0 318 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 OR13D1Q8NGV5 346 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 NRG4Q8WWG1 115 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 OPALINQ96PE5 141 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
SCLT1-204ENST00000503215 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 HHLA2Q9UM44 414 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 GSTK1Q9Y2Q3 226 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 GMPPBQ9Y5P6 360 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 hADV38S2A0JD32 116 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 A6NDX4 124 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 RBP4P02753 201 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 DBTP11182 482 aaKnown RBP13.1□□□□□ -0.31
SCLT1-204ENST00000503215 PEX2P28328 305 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 HERPUD1Q15011 391 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 RHOXF1Q8NHV9 184 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 MALSU1Q96EH3 234 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 ALG8Q9BVK2 526 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 TCF19Q9Y242 345 aa13.1□□□□□ -0.31
SCLT1-204ENST00000503215 OR2H2O95918 312 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 CSF1P09603 554 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 VSIG10L2P0DP72 767 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 GDNFP39905 211 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 GALEQ14376 348 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 UTF1Q5T230 341 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 Q8IYB0 196 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 LYG1Q8N1E2 194 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF676Q8N7Q3 588 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 OR2T6Q8NHC8 308 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 CFHR4Q92496 578 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 SPSB1Q96BD6 273 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 NPFFR1Q9GZQ6 430 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 SERTAD4Q9NUC0 356 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 PTTG2Q9NZH5 202 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
SCLT1-204ENST00000503215 LINC00312Q9Y6C7 94 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
SCLT1-204ENST00000503215 TET2Q6N021 2002 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-204ENST00000503215 IGHV2-26A0A0B4J1V2 119 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 FAM172BPA6NC97 362 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 MGST3O14880 152 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 KDM4BO94953 1096 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 ZFPL1O95159 310 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 CYB5AP00167 134 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 GLIPR1P48060 266 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 P2RX3P56373 397 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 PRKDCP78527 4128 aaKnown RBP13.08□□□□□ -0.31
SCLT1-204ENST00000503215 SCN1BQ07699 218 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 C2orf68Q2NKX9 166 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 PRAMEF5Q5TYX0 476 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 Q6P435 159 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 Q6ZTK2 550 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 OR52I1Q8NGK6 324 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 APH1BQ8WW43 257 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 DGCR14Q96DF8 476 aaKnown RBP13.08□□□□□ -0.31
SCLT1-204ENST00000503215 PDCD1LG2Q9BQ51 273 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 ZCCHC4Q9H5U6 513 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 RANBP3Q9H6Z4 567 aaPredicted RBP13.08□□□□□ -0.31
SCLT1-204ENST00000503215 S100A14Q9HCY8 104 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 RAB18Q9NP72 206 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 ERVK13-1Q9NX77 482 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 ING3Q9NXR8 418 aa13.08□□□□□ -0.31
SCLT1-204ENST00000503215 A0A0G2JK05 382 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 MT-ND2P03891 347 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 ZP1P60852 638 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 BLCAPP62952 87 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 AESQ08117 197 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 MED21Q13503 144 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 SMN1Q16637 294 aaKnown RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 FBLN7Q53RD9 439 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 SPIN3Q5JUX0 258 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 TRAPPC6BQ86SZ2 158 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 RPS4Y2Q8TD47 263 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 FOXRED1Q96CU9 486 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 Q9H521 79 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 FAM118AQ9NWS6 357 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 LOC100130705A0A1B0GUX0 176 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 SH2D1BO14796 132 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 OCM2P0CE71 109 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 OCMP0CE72 109 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 CD24P25063 80 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 ERP29P30040 261 aaKnown RBP13.07□□□□□ -0.32
SCLT1-204ENST00000503215 IL18R1Q13478 541 aa13.07□□□□□ -0.32
SCLT1-204ENST00000503215 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms